Etheostoma cragini (Arkansas darter): 117956750
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Entry
117956750 CDS
T07493
Name
(RefSeq) leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein 1
KO
K23533
leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ecra04131
]
117956750
Membrane trafficking [BR:
ecra04131
]
Endocytosis
Lipid raft mediated endocytosis
RhoA-dependent endocytosis
117956750
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_4
I-set
LRR_5
Ig_3
ig
Ig_2
LRR_9
LRRNT
V-set
Motif
Other DBs
NCBI-GeneID:
117956750
NCBI-ProteinID:
XP_034747873
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Position
14:14504270..14509308
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AA seq
609 aa
AA seq
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MFEGIAVHQWLCWGTLYLLAAGVALSSETRWLCPKSCRCDAVLLEVNCSDGQITTVPNGL
PQNPKLLNLTHNKIKTLVHQQFQTFTQLFELDLSDNIMVIIEVEAFLGLQSLITLRLARN
RLKIISVGVFAGLPKLKLLDISSNEILVFLDFTFRDLTALQFIEAVDNDLVFISHQAFTG
LTSLQELRLDGCNLTAVPTEALTQLGSLKRLHFYRMGVTMLPNYSFRHLERLKELLISHC
NWLENLSGNSLFGLNLTSLTIRHCNLSVVPYISLHHLVYLVYLDLSFNPITYIHENLFGD
LLRLQELHLVGGSLLRIEIGAFKGLSHFKLLNVSRNYLTTLEVGVFHSVDALRTLGLDNN
PLACDCRLLWVVQRRPYLDFNGNPPTCTTSVQLQGWYFLDFTEAEVPGLLTCRQPSILNP
KTQGVRVDQGHTVVFYCNTEGDPPPSVTWISPQLKPLSPIGRIRTLSNGSLEVRYAQPQD
SGTYLCVASNAAGNDSLLVSLNVRAFSSSSKKPFHLNGWFAFPSASPGVNGNQSIPLDFK
TLLVAATIGLISFFSSVSVCFIFMFFWSKSKGQIKHTATIAYVPRSAVSISNGGKGNYIE
TSRFTMKLI
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaagggattgctgtccaccaatggctgtgctggggaactctctacctcttggca
gcgggggtggcattatcatctgaaacacgctggctgtgtccaaagtcctgccgctgcgac
gccgtgctgctggaggtgaactgctctgatggccaaattaccacagtgcccaacggtctc
ccacaaaaccctaaactgctaaacctaacacataataagattaagacgctggtgcaccaa
cagttccagacttttacacaactttttgagttggatttgagtgacaatattatggtaata
attgaagtggaagcctttctcggcttgcaaagtctaataaccctgcgtcttgcccgcaac
cgcttgaagattatatctgtcggagtgtttgctggtttgccaaaactgaagttactggac
ataagcagcaatgagatccttgtttttctagattttactttccgtgacttaactgccctg
cagtttattgaagcagtagataatgacttagtttttatttctcatcaagcttttactggg
ttaaccagtctgcaagagctgcgccttgatggctgcaacctcactgctgtgccaacagag
gcactgacacagcttgggagcctgaaacgtcttcatttttaccgaatgggcgtcaccatg
ctgccaaactactcttttcgtcacctagagcgtctgaaggaacttctcattagtcattgc
aactggctggagaacctgtcaggaaacagtctctttggcctaaatcttacatcccttacc
attagacactgtaacctaagtgttgtcccctatatctctttgcatcatcttgtatatctt
gtataccttgacctttcttttaacccaatcacctacattcatgaaaacctgtttggagac
ttgctccggctccaagagctccatctggtgggaggatcattgctacgtatcgaaatcgga
gcattcaagggtttgtcacatttcaaattgctgaatgtatctagaaactatctcaccacc
cttgaggtaggagttttccattcggtggatgccctaagaactctgggacttgataacaac
ccactagcatgcgactgccgtctgctgtgggtggtgcagagacgaccatatctggacttc
aatggaaatccaccaacttgcaccacctccgtccagttgcagggatggtattttctagac
tttactgaagctgaggtcccaggcctgctcacttgtcggcagcctagtattctaaaccct
aaaactcaaggagtgagagtagatcaaggacacacggttgtgttttattgcaatacagaa
ggtgaccctccgccatctgtcacctggataagtcctcagcttaaacctctgtcacctatt
ggcagaatacgcactctctctaatggctcactggaggttcgctatgctcaacctcaagac
agtggtacttatctctgtgtggcatctaatgcggcaggaaatgatagcctgctcgtcagc
cttaatgtccgagccttttcatcatcttctaaaaaaccctttcatcttaatggttggttt
gcttttccatctgcttctccaggtgtgaatggaaatcagagtattccattagatttcaag
acgttactggtagctgcaaccattggattgatttcctttttcagctctgtgagcgtttgt
ttcatcttcatgtttttctggagtaagagtaaagggcaaataaagcacacagccacaata
gcatacgtgccacgaagcgctgtgtcaattagtaatggagggaaaggcaactatatagag
acaagcaggttcaccatgaaactaatatga
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