Etheostoma cragini (Arkansas darter): 117958294
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Entry
117958294 CDS
T07493
Symbol
si:ch211-106h11.1
Name
(RefSeq) LOW QUALITY PROTEIN: volume-regulated anion channel subunit LRRC8D
KO
K22038
volume-regulated anion channel
Organism
ecra
Etheostoma cragini (Arkansas darter)
Brite
KEGG Orthology (KO) [BR:
ecra00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
ecra04040
]
117958294 (si:ch211-106h11.1)
Ion channels [BR:
ecra04040
]
Chloride channels
Chloride channel, volume-regulated (VRAC)
117958294 (si:ch211-106h11.1)
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GFIT
Motif
Pfam:
Pannexin_like
LRR_8
LRR_4
LRR_1
LRR_9
Motif
Other DBs
NCBI-GeneID:
117958294
NCBI-ProteinID:
XP_034750515
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Position
15:1508365..1522680
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AA seq
905 aa
AA seq
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MFSLSELAPLNQHQNRSKLLKPWWEVFMDYLVVLMLMASVLACTEQLSRDRVVCVPLDPL
VTANTSTSGAALKPPLKPHVQRNIGPNLHSTARGRRTHLVYQQYVYVSQVCYHKALPLYS
RFFPYMAMLQSLVLVASGSFWLHFPHTSARIEHFLAILAKCCESPWTSQVLSHAARQESI
QEMEVAGKRPPPRPPLSSTSPSPSVTRTRRTSIDSGTDSPLLKRSFATPPSPCPSTLSCT
STLSSTSQVHCPLSKPSGVVDSPRQVTSLDKSDGEQTRALFERVRKFKSHSESSDVVYKV
RNPLIXRISIYLRIYLSIYLSMYRSVYLSIYVSIYLSIYLSIYRSIYLSTYVSIYLSIYL
SIYLRIYLSIYLSIYLSIYLSIYIIGLSVILCFGWLXSVFVCALLSSLRQYSFHSLKELR
SLRDVPDLRNDLAFLLHMLDQYDPLLAQRLSVFLSPVSESRLLEESVERRWGEEKLRAMT
SVDADGCCRLQLLALPRLPPALFTLSQLQVLKLELIADARFTAQVANMTSLRELHLYHCA
AAVDPSALGVLQDRLEILHLNFTQASEIPSWVLSLHNLHELHLSGRLNSDGGVGRSWALG
SLRQLRHLRVLVIRGMLQRIPVELCEVTGSLVRLDIHNEGTRLLVLTGLKRMVDLTELLL
QDCRLERLPSALLALTNLRTLDLQHNNLRTLEELLSLAHLRRLSCLRLACNRVLALPACI
GVLRGLELLDLSNNQLQSLPPALFTLRRLQRLLLAGNLLGVLPAEVKELKLLTELDLSGN
RVESLPPQLFSSCLELHILNVAHNSLGSLPAGIAALTRLCRLDLRSNSLEELPAELGCCT
GLHGGGLLVEDWLFLSLPPQVRDVLSRSGPHSGSYPESRSRPESDSFPYFSPTQWSFSSA
LESQI
NT seq
2718 nt
NT seq
+upstream
nt +downstream
nt
atgttttccctgtcggagctggcgcctctgaaccagcatcagaatcggagtaaactgttg
aagccctggtgggaggtcttcatggactacttggtggtcctgatgctgatggcatccgtc
ctggcttgcaccgagcagctgtccagggaccgagtggtgtgcgtgccattggatccactt
gttactgcgaatacctcaactagtggggctgcattgaagccaccattgaagccccatgtt
caacgcaacatcggcccaaatcttcattccacagcccggggtcgacgcacacacctggtc
taccagcagtacgtttacgtaagccaggtgtgctaccacaaggcgctgccgttgtactcc
cgcttcttcccctacatggccatgctccagtccctggtgctggtggccagcggctccttc
tggctccacttcccccacacctccgcccgcatagagcacttcctggccatcttggcaaag
tgctgcgagtccccgtggacctcccaggtcctgtctcacgccgcccgccaggagagcatc
caggagatggaggtggcggggaaaaggcctccaccccgacctccgctctcctcaacttca
ccttcaccctcggtgacacgcacacgacgaacgagcatcgactcgggcacagacagcccg
ctcttgaagaggtcctttgccacgcctccctccccgtgcccgtccacgctgtcctgtacc
tccaccctgtcgtccacgtcccaggtgcactgtcctctttccaagccctcaggcgtggtc
gacagccccagacaggtgactagtctggataaaagtgatggggagcagaccagggcgctg
ttcgaaagggtcaggaaatttaagtcccacagcgaaagctcagatgttgtttataaggtg
agaaatcctctaatctagaggatatctatctacctacgtatctatctatctatatatcta
tctatgtatcgatctgtctatctatctatctatgtatctatttatctatctatctatcta
tctatctatcgatctatctatctatctacctacgtatctatctatctatctatctatcta
tctatctacctacgtatctatctatctatctatctatctatctatctatctatctatcta
tctatctacataataggattgagtgtaattctgtgttttggttggctataatctgttttt
gtctgtgccctacttagctctctacggcagtactccttccactcactgaaggagttgcgc
tccctgcgagatgttcccgacctgagaaacgaccttgcctttctcttacatatgttagac
cagtacgaccctctgctggcccagcgtctgtccgttttcctgtccccggtgagcgagagc
aggctgctggaggagagcgtggagaggcgctggggcgaggagaagctgcgcgccatgacc
agcgtggatgcagacggctgctgcagactgcagctgctggccctgcctcgcctccctccg
gccctcttcaccctcagccagcttcaggtcctcaaactggagctcatcgcagacgccagg
tttactgcgcaggtggccaacatgacatcactcagggagctccacctctatcactgcgca
gcagcggtggatcccagtgcacttggagtcctccaggatcgtctggagatcctccacctc
aacttcacccaagcgtcagagatccccagctgggtcctctccctccacaacctgcatgag
ctccacctctctggccgcctaaacagcgatggcggcgtgggccgcagctgggctttgggc
agcctccgccaactacgtcacctccgcgtgctggtgatccgaggcatgttgcagcggatc
cccgtggagctgtgtgaggtgacgggcagcttggtgaggctggacatccacaacgaggga
accaggctgctggtgctgacaggcttgaagcggatggtcgacctgaccgagttgctgctg
caggactgccggttggagcgtctgccctccgccctgctggctctcaccaacctgcggaca
ctagacctgcagcacaacaacctaaggactctggaggaattgctcagcctggctcatctg
cgacgtctgtcttgcctcagactcgcctgtaaccgtgttctggcgttgccggcatgtatc
ggcgtgctgcgaggcctggagctcctggatctatccaacaaccagctccagagcctcccc
ccggcgctcttcacgctccgccgcctacagaggctcctgctggccgggaacctgctgggg
gtgctgcctgcggaggtgaaggagctgaagctgctcactgagctggacctcagcgggaac
cgggtggagagcctccccccgcagctcttcagcagctgtttggagctgcacatcctcaac
gtggctcacaactctctcggctcgttacccgcggggatcgcagctttaactcggctctgc
aggttggacctgcgcagcaacagtctggaggaactgcccgctgagttaggctgctgtaca
gggctgcatggaggcggtctcctggtggaggactggctgttcctgtctctgccgccccag
gtcagggacgtcctgagccgttctggcccccactctggctcgtacccagagagtcgttca
agaccagagtctgacagtttcccgtacttctctcctacgcagtggagcttctcttctgct
ctggaatcacagatttaa
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