Entomospira culicis: PVA46_01865
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Entry
PVA46_01865 CDS
T08829
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
ecul
Entomospira culicis
Pathway
ecul03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ecul00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PVA46_01865 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ecul03019
]
PVA46_01865 (rny)
Messenger RNA biogenesis [BR:
ecul03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
PVA46_01865 (rny)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KhpA-B_KH
DUF1411
KH_2
HDOD
Motif
Other DBs
NCBI-ProteinID:
WDI37558
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All DBs
Position
complement(388884..390416)
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AA seq
510 aa
AA seq
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MLNMILLVFSLAFTFFIGWISRWFYAKAQAKSSEQQALKNIAQIQKEAENERKELLLDAQ
SQLVTERKTQEKELRDQRQELQRLESRLLSKEDNLDRKMQATEKKLQSLSHKEKQLEEKE
HALEALLTQQHQELERVAGLTIEEAKEQLILAMEDEARRDARTLIGKIEQETKETAEKKA
RDILVTTIQRLSAEVTSDITVTAVSLPNDEMKGRIIGREGRNIRTLETLTGVDIIIDDTP
EVLVLSAYDPVRKAIAKAAIERLVSDGRIHPTRIEEVVQKITKEFNQLIFEEGDKAAFEL
GLTNLSNETLRVLGRLHFRSSYGQNVLAHSKEVSKIAGMIAAEVGANREVCKRAGLFHDV
GKGVDTDGDGNHAEVGAELMKKLGEKEAVVHAIMAHHNDVEPRTPEAIIIQVADAISASR
PGARRETLDGYIKRLEALEKIANSYQGVERAFAVQAGRELRILVNHEDISDEKMRVMGQK
IATQIENELKYPGRIRITLMRETRVIEYAK
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
atgttaaacatgattttattggtattttcccttgctttcacattttttattggttggatc
agtcgctggttctacgctaaggcgcaagccaaaagctccgaacaacaagccctcaaaaat
attgctcaaatccagaaggaagccgaaaacgaacgtaaagagctcctcttggatgcccaa
agtcaattagttactgaacgaaaaacccaagaaaaagagttacgcgatcaacgtcaagag
ctccagcgtcttgaaagtcgtctccttagcaaagaggacaaccttgatcgaaaaatgcaa
gcaacggaaaagaaattgcagagcctctcccacaaagagaagcaattagaagagaaagag
catgctctcgaagcactgctcacccaacaacaccaagagctcgaacgcgtcgcagggctc
accatcgaagaggccaaagagcaactcatccttgccatggaagatgaggcgcgtcgtgat
gccagaaccctcatcggtaagatcgagcaagagaccaaggagaccgccgaaaagaaagcg
cgcgacatccttgttaccaccatccagcgccttagcgccgaggttacctccgatattacc
gttaccgctgtcagcctgcccaacgacgaaatgaaaggtcgcatcatcgggcgagaaggt
cgcaatattcgcaccctagagacgctcaccggtgtcgatatcatcatcgatgacacccca
gaggttctcgtgcttagcgcctacgatcccgtgcgtaaagccatcgccaaggccgccatt
gagcgtctagtcagcgatgggcgcattcaccccacgcgtattgaagaagttgtacaaaaa
atcaccaaagaattcaatcagctcatctttgaagagggcgataaagccgcctttgagctg
ggtcttaccaaccttagcaacgagaccttacgcgtacttggtcgcctgcacttccgctct
agctatggacagaatgtacttgcccacagcaaagaagtcagtaagattgctggcatgatt
gccgccgaagtaggtgctaatcgtgaagtctgtaaacgcgccggtctcttccacgatgtc
ggtaaaggtgtcgacaccgatggtgatggtaatcatgccgaggtcggtgctgagctcatg
aaaaaattaggcgaaaaagaagccgttgttcatgctattatggcgcaccataacgatgtg
gaaccgcgcaccccagaagcgatcatcattcaagttgccgatgccatctccgcatcgcgt
cctggggcaagacgcgaaaccctcgacggctatatcaaacgacttgaagcactcgagaag
atcgccaatagctatcaaggcgtcgaacgcgccttcgccgtgcaagcggggcgagagtta
cgcattttagtcaatcacgaggatatttctgatgaaaaaatgcgcgtcatggggcaaaag
atcgccactcaaatcgagaacgaactcaaataccccggacgcatccgcatcaccctcatg
agagagacgcgcgtcattgaatacgccaaataa
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