Escherichia coli APEC O1 (APEC): APECO1_2931
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Entry
APECO1_2931 CDS
T00425
Symbol
gadB
Name
(GenBank) glutamate decarboxylase B, PLP-dependent
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
ecv
Escherichia coli APEC O1 (APEC)
Pathway
ecv00250
Alanine, aspartate and glutamate metabolism
ecv00410
beta-Alanine metabolism
ecv00430
Taurine and hypotaurine metabolism
ecv00650
Butanoate metabolism
ecv01100
Metabolic pathways
ecv01110
Biosynthesis of secondary metabolites
ecv01120
Microbial metabolism in diverse environments
ecv02024
Quorum sensing
Module
ecv_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
APECO1_2931 (gadB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
APECO1_2931 (gadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
APECO1_2931 (gadB)
00430 Taurine and hypotaurine metabolism
APECO1_2931 (gadB)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
APECO1_2931 (gadB)
Enzymes [BR:
ecv01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
APECO1_2931 (gadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-ProteinID:
ABJ02999
UniProt:
A0A0H2Z472
LinkDB
All DBs
Position
complement(3965752..3967182)
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AA seq
476 aa
AA seq
DB search
MXSNXFKEFXMDXKXXTDXXSELLDSRFGAKXISTIAESKRFPLHEMRDDVAFQIINDEL
YLDGNARQNLATFCQTWDDXNVHKLMDLSINKNWIDKEEYPQSAAIDLRCVNMVADLWHA
PAPKNGQAVGTNTIGSSEACMLGGMAMKWRWRKRMEAAGKPTNKPNLVCGPVQICWHKFA
RYWDVELREIPMRPGQLFMDPKRMIEACDENTIGVVPTFGVTYTGNYEFPQPLHDALDKF
QADTGIDIDMHIDAASGGFLAPFVAPDIVWDFRLPRVKSISASGHKFGLAPLGCGWVIWR
DEEALPQELVFNVDYLGGQIGTFAINFSRPAGQVIAQYYEFLRLGREGYTKVQNASYQVA
AYLADEIAKLGPYEFICTGRPDEGIPAVCFKLKDGEDPGYTLYDLSERLRLRGWQVPAFT
LGGEATDIVVMRIMCRRGFEMDFAELLLEDYKASLKYLSDHPKLQGIAQQNSFKHT
NT seq
1431 nt
NT seq
+upstream
nt +downstream
nt
wtgcswtcmaatmawtttaaggagttyraaatggaymagaagcwrktaacggatttmmgs
tcrgaactactcgattcacgttttggygcraagkcyatttcyactatcgcagaatcaaaa
cgwtttccgctgcacgaaatgcgygatgatgtygcattycagattatcaatgatgaatta
tatcttgatggcaacgctcgtcagaacctggccactttctgccagacctgggacgacgaw
aaygtccataarttgatggatttrtcsatyaayaaaaactggatcgacaaagaagaatat
ccgcaatcygcwgcaatcgayctgcgttgcgtaaacatggttgccgatctgtggcatgcg
cctgcaccgaaaaatggtcaggccgttggcaccaacaccattggttcttccgaggcctgt
atgctcggcgggatggcgatgaaatggcgttggcgcaagcgtatggaagctgcaggtaag
ccgactaacaaaccgaacctggtgtgcggtccggtacaaatctgctggcataaattcgcc
cgctactgggatgtggagttgcgtgagatccctatgcgccccggtcagttgtttatggac
ccgaaacgcatgattgaagcctgcgacgaaaacaccatcggcgtggtgccgactttcggc
gtgacctacaccggtaactatgagttcccgcagccgctgcacgatgcgctggataaattc
caggccgacaccggtatcgacatcgacatgcacatcgacgccgccagcggtggcttcctg
gcaccgttcgtcgccccggatatcgtctgggacttccgcctgccgcgtgtgaaatcgatc
agtgcttcaggccataaattcggtctggctccgctgggctgcggctgggttatctggcgt
gatgaagaagcgctgccgcaggaactggtgttcaacgttgactacctcggcggtcagatt
ggtactttcgccatcaacttctcccgcccggcgggtcaggtgattgcacagtactatgaa
ttcctgcgcctcggtcgtgaaggctataccaaagtacagaacgcttcctaccaggttgct
gcttatctggcggatgaaatcgccaaactggggccgtatgagttcatctgtacsggtcgc
ccggacgaaggcatcccggcggtttgcttcaaactgaaagatggtgaagatccgggatac
accctgtatgacctctctgaacgtctgcgtctgcgcggctggcaggttccggccttcact
ctcggcggtgaagccaccgacatcgtggtgatgcgcattatgtgtcgtcgcggcttcgaa
atggactttgctgaactgttgctggaagactacaaagcctccctgaaatatctcagcgac
cacccgaaactgcagggtattgcccagcagaacagctttaaacacacctga
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