Escherichia coli APEC O1 (APEC): APECO1_3020
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Entry
APECO1_3020 CDS
T00425
Symbol
gntR
Name
(GenBank) DNA-binding transcriptional repressor
KO
K06145
LacI family transcriptional regulator, gluconate utilization system Gnt-I transcriptional repressor
Organism
ecv
Escherichia coli APEC O1 (APEC)
Brite
KEGG Orthology (KO) [BR:
ecv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ecv03000
]
APECO1_3020 (gntR)
Transcription factors [BR:
ecv03000
]
Prokaryotic type
Helix-turn-helix
LacI family
APECO1_3020 (gntR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_1
Peripla_BP_3
LacI
Peripla_BP_4
HTH_3
HTH_10
DUF2701
Motif
Other DBs
NCBI-ProteinID:
ABJ02910
UniProt:
A0A0H2Z3P8
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All DBs
Position
complement(3872679..3873674)
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AA seq
331 aa
AA seq
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MKKKRPVLQDVADRVGVTKMTVSRFLRNPEQVSVALRGKIAAALDELGYIPNRAPDILSN
ATSRAIGVLLPSLTNQVFAEVLRGIESVTDAHGYQTMLAHYGYKPEMEQERLESMLSWNI
DGLILTERTHTPRTLKMIEVAGIPVVELMDSKSPCLDIAVGFDNFEAARQMTTAIIARGH
RHIAYLGARLDERTIIKQKGYEQAMLDAGLVPYSVMVEQSSSYSSGIELIRQARREYPQL
DGVFCTNDDLAVGAAFECQRLGLKVPDDMAIAGFHGHDIGQVMEPRLASVLTPRERMGSI
GAERLLARIRGESVIPKMLDLGFTLSPGGSI
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaagacccgtacttcaggatgtggctgaccgtgtaggcgtgaccaaaatg
acggtcagccgttttttacgcaacccggagcaggtttccgtcgctctacgcggcaagatt
gccgccgctcttgatgaactgggttatattcccaatcgcgcgcccgatatactctctaac
gctaccagccgggcgattggcgtcctgttaccttctctcaccaaccaggttttcgcggaa
gtattacgcggaatcgaaagcgtcaccgacgcgcacggttatcaaaccatgctggcgcac
tacggttataaaccggaaatggagcaagaacgcctcgaatcaatgctctcatggaatatc
gacggcctgatcctcaccgaacgtacccacacgccgcgtaccttaaagatgattgaagtg
gcggggattccggtggtggagttgatggacagtaagtcgccgtgcctcgatatcgccgtc
ggttttgataactttgaagcggcacgccagatgaccaccgccattattgctcgcgggcat
cgtcacattgcctatctcggcgcacgcctcgacgaacgtactatcatcaaacagaaggga
tacgaacaggcgatgctggatgcaggcctggtgccgtatagcgtgatggttgagcaatct
tcttcttactcttccggtattgaactgattcgccaggcgcggcgggaatatccgcagctg
gatggcgtgttctgtactaatgatgacctggcggtcggcgcggcgtttgaatgtcagcgt
ttggggttgaaagttcctgacgatatggcgattgccggtttccacggtcatgacattggt
caggtgatggagccacggctagcgagtgtgctgacgccgcgtgagcggatgggcagcatt
ggcgctgagcgcctgctggcgcgtattcgtggcgaatctgtgataccgaaaatgttagat
ttaggtttcaccttgtcaccgggcggatctatttaa
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