Edaphobacter sp. 12200R-103: GWR55_01705
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Entry
GWR55_01705 CDS
T06408
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eda03021
]
GWR55_01705
Transcription machinery [BR:
eda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR55_01705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HROB
Motif
Other DBs
NCBI-ProteinID:
QHS50606
UniProt:
A0A6B9YME7
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All DBs
Position
387691..388332
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AA seq
213 aa
AA seq
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MNGSLERERDESGLIGKICQGQTELFQTLIKPYERTVFAVAYSVMNNGADAEDVAQEAFL
NALRGLKSFRAEAKFSTWLIQIAFNEARMRLRRSRIRAHQSLEEIVGNEESDYVPRDFAD
WREIPSEALARKELRQIIEKTLQSLRPIYRQVLILRDVRGLSTAETSQVLNITEDVVKTR
LRRARLQMREALAPGYDGSWTSESKVYKSVRPW
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaagtctcgaacgagagcgagatgagagcgggttgataggcaaaatatgccaa
gggcaaacggagctgtttcaaacgcttattaagccatatgaacgcactgtctttgccgtc
gcctactctgtcatgaacaatggtgcggatgctgaagacgtcgcacaagaggcattcctg
aatgcattaagagggctgaagagttttcgcgcagaagctaaattcagcacctggctaatc
cagatcgcgttcaatgaggcgcgcatgcgattgcgccgcagccgcatccgggcgcaccaa
tcgctggaggagattgtggggaacgaagaaagcgattatgtgcccagagattttgcggat
tggcgggaaattccgagcgaagcgttggcgcgcaaggagttgaggcaaatcatcgagaaa
acccttcaatctcttcgaccgatttataggcaagttcttattctccgtgatgtacgaggt
ctcagtactgccgaaacgtcacaggttttaaacattacggaggacgtcgtgaaaacgcgc
cttagacgcgcaagattacaaatgcgtgaggcgctagccccaggttacgacggcagttgg
acatctgaatcgaaggtgtataaaagtgtgagaccgtggtga
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