Edaphobacter sp. 12200R-103: GWR55_02580
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Entry
GWR55_02580 CDS
T06408
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eda03021
]
GWR55_02580
Transcription machinery [BR:
eda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR55_02580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
HTH_30
OPA1_C
Rv0078B
Motif
Other DBs
NCBI-ProteinID:
QHS50755
UniProt:
A0A6B9YND5
LinkDB
All DBs
Position
complement(607494..608114)
Genome browser
AA seq
206 aa
AA seq
DB search
MQSQDKERDETALIAEILGGKTDAFHELIRPYERSVYLMALSMLRNEADAEDVAQEAFIK
AYRNLGRFRSEARFSTWLIAIALNEARARLRRKQPGLTDSIDDQEGPVVPAQLTDWREIP
SESLERQEIRSIIRRALEALPLHYREVFMLREIEERNVKETAETLGITIASVKMRLHRAR
MMLQKQLAPQLTSATETKRRRRFPWF
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgcagtcccaggataaagagagggacgagaccgccctgattgcggagattctgggcggc
aagacggatgccttccatgagctgattcgcccctatgagcgtagtgtgtacctcatggca
ctctcgatgcttcgcaacgaggcggacgcggaggacgtcgcgcaggaggcgttcatcaag
gcttatcgcaacctggggcggttccgttccgaagcccgattcagtacatggctgatcgcc
atcgcgctcaacgaggctcgcgcgcgtctgcgccggaaacagccagggctcacggattcc
atcgacgaccaggaaggtccggtcgttccagcgcagcttaccgactggcgcgagatcccg
tcggagagccttgaacgccaggagattcgctccatcattcgccgtgcccttgaggcactt
ccgctccactatcgtgaggtcttcatgcttcgcgagattgaagaacgtaatgtgaaggag
accgccgagacgctgggaattaccatcgcctcggttaagatgaggctgcatcgtgcacgg
atgatgctgcagaaacagcttgcgccacagctcaccagtgccacggagacgaagcgccgc
aggaggttcccatggttctga
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