Edaphobacter sp. 12200R-103: GWR55_10245
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Entry
GWR55_10245 CDS
T06408
Name
(GenBank) RNA polymerase sigma factor
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
eda
Edaphobacter sp. 12200R-103
Brite
KEGG Orthology (KO) [BR:
eda00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eda03021
]
GWR55_10245
Transcription machinery [BR:
eda03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
GWR55_10245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
HTH_IclR
HTH_40
HTH_5
GerE
Motif
Other DBs
NCBI-ProteinID:
QHS52078
UniProt:
A0A6B9YQR9
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All DBs
Position
2468785..2469387
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AA seq
200 aa
AA seq
DB search
MLTRTATADLFAQASEAAAALPTPFDDLAAVIETHRPRIYRFLLASLRDADLAETLTQET
FLRAWSSRSSFRGDCAVTTWLTRIALNLIRDHTRTHRFRFWRKISAQSIDADEIAAFLPH
RDSAVDCRLIATEQVGILWQAVSTLSDRQRTIFLLRFVEEMELSEIVAATGIPLSTVKSH
LYRALTHIRERHSKLSRKTV
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atgctgaccaggaccgcaaccgccgatctctttgcccaggcctcagaggcagccgccgcg
ctgccgacgccgttcgatgacctcgcggccgttatcgaaactcatcgtccgcgcatctat
cgtttcctgctcgcttccctgcgcgatgccgatctcgccgagaccctcacccaggagacg
tttctccgcgcctggagctcccgttccagctttcgcggcgactgcgccgttaccacctgg
cttacccgcatcgcgctcaatctcatccgcgaccacacacggacccatcgcttccgcttc
tggcgcaagatctccgctcaatccatcgacgccgatgagatcgcggcctttcttccgcat
cgcgattccgccgtggactgccgcctgattgccaccgaacaggtcggcatcctctggcaa
gccgtcagtaccctctccgaccgccaacgcaccatctttctcctacggttcgtcgaggag
atggagctctcggagatcgtcgcagcgacgggaatccctcttagcaccgtcaagagccat
ctctaccgtgcactgacccacattcgcgaacgccattcgaaactctccaggaaaaccgta
tga
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