Electrophorus electricus (electric eel): 113567668
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Entry
113567668 CDS
T05787
Symbol
kdm2b
Name
(RefSeq) lysine-specific demethylase 2B isoform X1
KO
K10276
F-box and leucine-rich repeat protein 10/11 [EC:
1.14.11.27
]
Organism
eee
Electrophorus electricus (electric eel)
Pathway
eee03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
eee00001
]
09120 Genetic Information Processing
09126 Chromosome
03083 Polycomb repressive complex
113567668 (kdm2b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eee03000
]
113567668 (kdm2b)
04121 Ubiquitin system [BR:
eee04121
]
113567668 (kdm2b)
03036 Chromosome and associated proteins [BR:
eee03036
]
113567668 (kdm2b)
Enzymes [BR:
eee01000
]
1. Oxidoreductases
1.14 Acting on paired donors, with incorporation or reduction of molecular oxygen
1.14.11 With 2-oxoglutarate as one donor, and incorporation of one atom of oxygen into each donor
1.14.11.27 [histone H3]-dimethyl-L-lysine36 demethylase
113567668 (kdm2b)
Transcription factors [BR:
eee03000
]
Eukaryotic type
Zinc finger
CXXC CpG-binding proteins
113567668 (kdm2b)
Ubiquitin system [BR:
eee04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
SCF complex
Target recognizing subunit (F-box)
113567668 (kdm2b)
Chromosome and associated proteins [BR:
eee03036
]
Eukaryotic type
Histone modification proteins
Histone demethylases
113567668 (kdm2b)
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.1)
113567668 (kdm2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PHD_4
zf-CXXC
F-box-like
F-box
PHD
Pho88
Motif
Other DBs
NCBI-GeneID:
113567668
NCBI-ProteinID:
XP_026851561
LinkDB
All DBs
Position
Unknown
AA seq
855 aa
AA seq
DB search
MAMSLSADDEDYDSDTAEQQRPANRPKPKMAATATASMATTSSTATAVKLPSNRSSSGAR
RRRTRCRKCEACVRTECGECHFCKDMKKFGGPGRMKQSCIMRQCIAPVLPHTAVCVVCGE
AGKEDTLDDDEEKFNAMLMECSICNEIVHPNCLKVKDAAGVVNDELPNCWECPKCNYAGK
TGKACKQKRGPGFKYASNLPGSLLREQRGGRDGRDEAEQAAIAAATARRKSERDDAPRPS
PEEPVARLPPLLTPRDLPRPRPDVPNFLRKKKKLFDDDEEEDEASAKKKLKRPWRSEEPL
IAPMKMEEEELEEEQEEETKLSPRLLTKKEEETKLSPRLLTKKEEESKLSPHLLTKKELS
SIRKQEEHEQEKDEDEEEEEEEGGLPVPACSPMQKSLPLCVESDTSQCSSPRAGPSSEGS
EGQERVPRARVRRPRRRAPRRQLGAELSKHLNLEIRRTELSLANENQQPLQSEPEDSENE
EPKRSFRNGAAGGGAGPGPEVGGVGGERPHLRAREMNGTAWELRHFYPSHITPLGLNRSS
PTLRPPPTRSPPKCVQMERHVIRPPPICPPPDRLPLADGRSHVAQRELWLAIFSYLSHRE
LCVCMRVCRTWNRWCCDKRLWTRVDLSRCKSITPLMLSGVIRRQPVTLDLSWTNISKKQL
SWLLNRLPGLRVLLLSGCSWVAVSALCTSSCPLLRTLDLQWVEGLKDPQIRDLLSPPTDN
RPGQIDTRSKLRNVLDLCLAGLDVTDGSLRLIIKNMPLLARLNLSYCNHVNDQSVNLLTA
AGTTTRDSLTHINLSVCNRVTDQSLSYFKRCANICCIDLRYCKQVSQQACERFIAEMSVS
VSFGLREDKLLQKLC
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggccatgtctctgagcgcagacgatgaagactacgactccgacacagccgaacagcag
cggccagccaatcggcccaaacccaaaatggctgccacagcaacggcatccatggcaacc
acatcgtccacagcaaccgccgtcaagctcccgtctaaccggagttcttcgggggcgcgg
cgcaggcggacacggtgcaggaagtgtgaggcttgcgtgcgtacagagtgtggagagtgt
cacttctgtaaggacatgaagaagttcggagggccaggacgcatgaaacagtcctgtatt
atgaggcagtgtatcgctcccgttctgccccacacagcggtgtgtgtggtgtgtggtgag
gctggtaaagaggacacactcgatgacgatgaggagaagtttaacgcaatgctaatggag
tgctccatctgcaatgagattgttcacccaaactgcctcaaggtgaaggacgcagctgga
gtcgtgaacgatgaactgcccaactgctgggaatgtcccaaatgtaactacgctgggaag
acaggaaaagcctgtaagcaaaaacgtggtccagggtttaaatacgcctccaacctgccg
ggttccctgctgagggagcagaggggagggcgtgatgggcgggatgaggcggagcaagcc
gccatcgccgcggctacagcccggaggaaaagcgagagggacgacgcccccagaccgtcc
ccagaggagcccgtggcacgcctccccccactgcttacacccagggacctgccccgacca
cgccccgacgtgcccaacttcctcaggaagaagaaaaaactgtttgatgatgatgaagag
gaagacgaggctagtgctaaaaagaagctcaagaggccttggaggtctgaggaaccttta
attgccccaatgaagatggaggaggaggagctggaggaggagcaagaggaggagactaaa
ctctcgccccgcctcctcaccaaaaaggaggaggagactaaactctcgccccgcctcctc
accaaaaaggaggaggaatctaaactctcgccccacctcctcaccaaaaaggagctgagc
tctatccgaaaacaggaagagcatgaacaagagaaagatgaggatgaggaggaggaggag
gaagagggcggcctgcctgtgccggcgtgcagccccatgcagaagagcctgccactgtgt
gtggagagcgacacatcacagtgcagctccccaagggcagggccgagcagcgagggcagc
gagggtcaggagcgcgtaccccgggcgcgcgtgcgcaggccccgtcgccgggcgcccaga
cgccagctcggcgctgagctcagcaaacatctgaacttggagatccgccggaccgagctc
tcactggccaacgagaaccagcagccgcttcagagcgagccagaggacagcgagaacgag
gagcccaagagaagcttccggaatggggcagcagggggcggagccgggcccgggccggag
gtgggcggggtcggtggcgagaggccgcaccttcgtgcacgtgagatgaacggcacggcc
tgggagctccggcacttctacccctcccacatcaccccgctgggtttgaaccgcagctca
cccaccctgcgcccgcccccgacacgctcaccgccaaagtgtgtgcagatggagcggcac
gtgatccggcccccgcccatctgcccaccacctgataggctgccgctggctgatgggcgg
agccacgtggctcagcgggagctctggttggctatcttcagttacctgagccaccgtgag
ctgtgcgtgtgcatgcgtgtgtgccggacctggaaccgctggtgctgtgataagcgtctg
tggacccgggtggatctaagccgctgtaagtccatcactcccttgatgctgagtggtgtc
atacgcagacaaccagtcacactggacctcagctggaccaacatctccaaaaaacaactc
agctggctactgaaccgactgccaggtctgcgggtgctgctcctctctggatgctcctgg
gtagctgtgtcagctctgtgcacctccagctgtcccctcctccgcacgctggacctgcag
tgggtggagggtctcaaagacccccagatcagggacctactgtcgccccctacagacaat
aggccaggtcagatagacacgcgcagtaagctgcggaacgtcctggatctgtgtctggcg
gggctggacgtgacggacgggtctctgcgcctcatcattaagaacatgcccctgttagca
cgactcaacctcagttactgcaaccacgtcaacgaccagtccgtcaacttgctgaccgcc
gcagggaccaccacccgcgactcgctcacacacatcaacctgtcggtgtgtaacagggtg
acggatcagtctctgagctacttcaaacgctgtgccaacatctgctgtatagacctgcgc
tactgtaagcaggtgagccagcaggcgtgtgagcgcttcatcgcagagatgtccgtcagc
gtctcgtttggcctgcgggaagacaagctgctacaaaaactctgctag
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