Escherichia fergusonii: EFER_0114
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Entry
EFER_0114 CDS
T00811
Symbol
ddlB
Name
(GenBank) D-alanine:D-alanine ligase
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
efe
Escherichia fergusonii
Pathway
efe00470
D-Amino acid metabolism
efe00550
Peptidoglycan biosynthesis
efe01100
Metabolic pathways
efe01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EFER_0114 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EFER_0114 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EFER_0114 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
efe01011
]
EFER_0114 (ddlB)
Enzymes [BR:
efe01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EFER_0114 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
efe01011
]
Precursor biosynthesis
Amino acid ligase
EFER_0114 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATPgrasp_YheCD
ATPgrasp_ST
TTL
GARS_A
Luciferase_N
Motif
Other DBs
NCBI-ProteinID:
CAQ87697
UniProt:
B7LWF8
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All DBs
Position
124202..125122
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AA seq
306 aa
AA seq
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MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGVDAYPVDPKDVDVAQLKSMGFQKVFI
ALHGRGGEDGTLQGMLELLGLPYTGSGVMASAISMDKLRSKLLWQGAGLPVAPWVAITRT
EFEKGLSDEVVKQISALGLPLIVKPSREGSSVGMSKVVAENSVENALKLAFQHDDEVLVE
KWLSGPEFTVAILGEEILPSIRIQPAGTFYDYEAKYLSDETQYFCPSGLEAEQESILKSL
VQKAWTTLGCKGWGRIDVMLDDDGQFYLLEANTSPGMTSHSLVPMAARQAGMSFSQLVVR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgactgataaaattgctgttctgctgggtggcacttccgcagagcgggaagtttcactg
aattcaggtgcggctgtgttggcgggtctgcgtgaaggcggtgtagatgcatatcctgtc
gacccgaaagacgtcgatgtggcacagctgaaatccatgggatttcaaaaggtgtttatt
gccctgcatggccgtggcggtgaggacggtaccctacaaggtatgcttgagcttctgggc
ttaccttataccggtagtggtgtgatggcttcagctatttcaatggacaagctgcgtagc
aaattattatggcaaggggcagggctgcccgttgctccatgggtggcaatcacgcgtact
gagtttgaaaaagggcttagtgatgaagtggttaaacaaatttctgcgttaggtttacca
ttaatagtgaaaccaagccgcgaaggctcaagcgttggaatgtcgaaagtagtagcagaa
aattctgttgaaaatgcattaaaattggcatttcagcatgatgacgaagttctggttgaa
aaatggctaagtgggccggagttcacggttgcgatactcggagaagaaattttaccatcg
attcgtatccaacctgctggaaccttctatgattatgaggcgaaatatctctctgatgag
acacaatatttctgtccatctggtctggaagcagaacaagagtcgattttaaagtcgtta
gtgcaaaaagcatggacaactttaggctgcaaaggatggggacgcattgacgtcatgttg
gatgatgatgggcagttttatctgctggaagcgaatacctcgccggggatgaccagccat
agtctggtgccaatggctgcgcgtcaggcaggaatgagtttttcgcagttggtagtacga
attctggaattggcggactga
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