Escherichia fergusonii: EFER_0410
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Entry
EFER_0410 CDS
T00811
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase, PLP-dependent
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
efe
Escherichia fergusonii
Pathway
efe00250
Alanine, aspartate and glutamate metabolism
efe00280
Valine, leucine and isoleucine degradation
efe00310
Lysine degradation
efe00410
beta-Alanine metabolism
efe00640
Propanoate metabolism
efe00650
Butanoate metabolism
efe01100
Metabolic pathways
efe01120
Microbial metabolism in diverse environments
Module
efe_M00027
GABA (gamma-Aminobutyrate) shunt
efe_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
EFER_0410 (gabT)
00650 Butanoate metabolism
EFER_0410 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
EFER_0410 (gabT)
00280 Valine, leucine and isoleucine degradation
EFER_0410 (gabT)
00310 Lysine degradation
EFER_0410 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
EFER_0410 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
efe01007
]
EFER_0410 (gabT)
Enzymes [BR:
efe01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
EFER_0410 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
EFER_0410 (gabT)
2.6.1.48 5-aminovalerate transaminase
EFER_0410 (gabT)
Amino acid related enzymes [BR:
efe01007
]
Aminotransferase (transaminase)
Class III
EFER_0410 (gabT)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AP_endonuc_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
CAQ87971
UniProt:
B7LT08
LinkDB
All DBs
Position
complement(420301..421581)
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AA seq
426 aa
AA seq
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MSSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP
KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK
IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE
DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYAATPAFMQRLRALCDEHGIMLIADE
VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG
NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHTEIGDVRGLGAMIAIELF
EGGDHSKPDAKLTTEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC
FDETKQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgagcagcaataaagagttaatgcaacgccgcagtcaggcgattccccgtggcgttggg
caaattcacccgattttcgctgatcgcgcagaaaactgtcgggtgtgggacgttgaaggc
cgtgagtatcttgatttcgcgggcgggattgcggtgctcaataccgggcacctgcatccg
aaagtggtggcggctgtggaagcgcagttgaaaaagctgtcgcacacttgcttccaggtg
ctggcttacgagccgtatctggagctgtgcgagattatgaatcagaaggtgccgggcgat
ttcgccaaaaaaacgctgctggtcaccacggggtccgaagcggtggaaaacgcggtgaaa
atcgcccgcgccgccaccaaacgcagcggcaccatcgcctttagcggcgcttatcacggg
cgtacgcactacacgctggcgctgaccggcaaggtgaatccgtactctgctggcatgggg
ctgatgccagggcatgtttatcgcgcgctttatccgtgtccactgcacggcatcagtgaa
gatgacgctatcgccagcatccaccggatcttcaaaaatgacgccgcgccggaagatatc
gccgccatcgtgattgagccggttcagggtgaaggcggtttctacgccgcgacacctgcg
tttatgcagcgtttacgcgcgctgtgtgacgagcacgggatcatgttgattgccgatgaa
gtgcaaagcggcgcgggacgtaccggcacgctgtttgcgatggagcaaatgggcgtcgcg
ccggatctcaccacctttgcgaaatcgatcgcaggcggtttcccgctggcgggcgtcacc
gggcgcgccgaagtgatggacgctgtcgcaccgggcggcttaggcggcacttatgcgggt
aacccgattgcctgcgtcgcggcgctggaagtgttgaaggtgtttgaacaggaaaatctg
ctgcaaaaagccaacgatctggggcaaaagctgaaagacggattgctggcgatcgccgaa
aaacacaccgagatcggcgatgtacgtggtctgggagcgatgatcgccatcgagctgttt
gaaggtggagatcatagcaaaccggacgccaaactcaccaccgagatcgtggcgcgcgcc
cgcgataaaggcctgattcttctctcctgcggcccgtattacaacgtgctgcgcatcctt
gtaccgctcaccattgaagacgctcagatccgtcagggtctggagatcatcagccagtgt
tttgatgagacgaagcagtag
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