Escherichia fergusonii: EFER_3987
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Entry
EFER_3987 CDS
T00811
Symbol
dgoD
Name
(GenBank) galactonate dehydratase
KO
K01684
galactonate dehydratase [EC:
4.2.1.6
]
Organism
efe
Escherichia fergusonii
Pathway
efe00052
Galactose metabolism
efe01100
Metabolic pathways
efe01120
Microbial metabolism in diverse environments
Module
efe_M00552
D-galactonate degradation, De Ley-Doudoroff pathway, D-galactonate => glycerate-3P
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
EFER_3987 (dgoD)
Enzymes [BR:
efe01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.6 galactonate dehydratase
EFER_3987 (dgoD)
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Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-ProteinID:
CAQ91421
UniProt:
B7LK34
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All DBs
Position
complement(4091754..4092902)
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AA seq
382 aa
AA seq
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MKITKITTYRLPPRWMFLKIETDEGVVGWGEPVIEGRARTVEAAVHELSDYLIGQDPSRI
NDLWQVMYRAGFYRGGPILMSAIAGIDQALWDIKGKVLNAPVWQLMGGLVRDKIKAYSWV
GGDRPADVIDGIKTLREIGFDTFKLNGCEELGLIDNSRAVDAAVNTVAQIREAFGNQIEF
GLDFHGRVSAPMAKVLIKELEPYRPLFIEEPVLAEQAEYYPKLAAQTHIPLAAGERMFSR
FDFKRVLEAGGISILQPDLSHAGGITECYKIAGMAEAYDVTLAPHCPLGPIALAACLHID
FVSYNAVLQEQSMGIHYNKGAELLDFVKNKEDFSMVGGFFKPLMKPGLGVEIDEAKVIEF
SKNAPDWRNPLWRHEDNSVAEW
NT seq
1149 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccaaaattactacgtatcgtttacctccccgctggatgttcctgaaaatt
gaaactgatgaaggcgtggtcggttggggcgagcccgtgatcgaaggccgcgctcgtacg
gtggaagcggcagttcacgagctgagtgactatttgattggtcaggatccatcgcgcatc
aatgacttatggcaagtgatgtatcgcgccggattttatcgtggcggtccgattctgatg
agcgccatcgccgggatcgaccaggcgttatgggatatcaaaggtaaagtgctgaatgcg
ccggtctggcaattgatgggtggcctggttcgcgacaaaattaaagcctacagttgggtc
ggcggcgatcgtccggcggatgttatcgacggcattaaaacgctacgtgaaatcggcttc
gataccttcaaactgaacggttgtgaagaactgggattgattgataactcccgcgcggta
gatgcggcggtcaacaccgtggcacaaattcgtgaagcttttggcaatcagattgagttt
ggtcttgatttccacggtcgcgtcagcgcgccgatggcgaaagtgttgattaaagaactg
gaaccgtatcgcccgctgtttattgaagaaccggtgctggcggaacaagccgaatactac
ccgaaactggcggcacaaactcacatcccactggcggcgggtgagcgcatgttctcacgt
ttcgattttaaacgtgtgctggaagctggcggtatttcgattctgcaaccggatctctcc
cacgcaggcggtattaccgaatgctacaaaattgccggaatggcggaagcctatgacgtg
acccttgcgccgcactgtccgctcggcccgattgcactggcggcttgcctgcatatcgac
tttgtttcctataacgcggtacttcaggaacaaagtatgggcattcactacaacaaaggc
gcggagttactcgactttgtgaaaaacaaagaagacttcagcatggtcggcggcttcttt
aaaccgttaatgaaaccgggcttaggcgtggaaatcgacgaagccaaagttattgagttc
agtaaaaatgccccggactggcgtaatccgctctggcgtcatgaagataacagcgtagca
gagtggtaa
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