Epinephelus fuscoguttatus (brown-marbled grouper): 125879253
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Entry
125879253 CDS
T08419
Symbol
cacna1ha
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H isoform X1
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04010
MAPK signaling pathway
efo04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
125879253 (cacna1ha)
04020 Calcium signaling pathway
125879253 (cacna1ha)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
efo04040
]
125879253 (cacna1ha)
Ion channels [BR:
efo04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
125879253 (cacna1ha)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
FmiP_Thoc5
Motif
Other DBs
NCBI-GeneID:
125879253
NCBI-ProteinID:
XP_049416954
LinkDB
All DBs
Position
LG19:30331968..30495643
Genome browser
AA seq
2542 aa
AA seq
DB search
MTDGEGRARFQYAECPEGQEQEEVHKEVRLAIPTAYRNDAPGHDVDPGGGHDEEEAEEVE
RRGSVTGQGSGGEWSPEVQEEQEDQEPELEVEVGPTLGVRIRAPIRDPDCVSEEEEQQPY
PALAPVAFFCLKQTTRPRNWCLRVVCNPWFEHVSMLVILLNCVTLGMFQPCEDVSCQSEW
CRILQVLDDCIFAFFAVEMVIKMVALGIFGSNCYLGDKWNQLDFVIVMAGVMEYSLDGHN
ASLSAIRTVRVLRPLRAINRVPSMRILVTLLLDTLPMLGNVLLLCFFVFFIFGIVGVQLW
AGLLRNRCFLGEDIRTMYNLSISPYYMSEEGEDSPFICSAPRENGMLRCHSVPPHTEGGA
ECSLAAPHQSSALIGSVGGASVNGCVNWNQYYNVCRPGDHNPHKGAVNFDNIGYAWIAIF
QVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVGSFFMINLCLVVIATQFSETKQRENAL
MREQRARYMSNDSTLASYSEPGSCYEEMLRYISHLYRKFTRRLQRIYSGWHSKRRKKVNP
NGSSGGSNGGGNGHGHSSSRTCGGLGPGSALWLRPIHNLLQHHQHQHCRLSNGGQHTITV
TTAEHTDGEGGEELEMKSLPVRRGSTNGNSGGSGGNPSVVTQGMGALLGRLNGGMNYPTI
LPSFVCSYSSKTPPPHSQQCGHSPEQHPPNHPASEHAETLNKLYQLMGQHSRQRLLYQLA
GVVPSPLLLELLSCPLCARSLETLELELGDLEGGRGEADGLHDFPQVRLQVGGLMMTAGD
LRGGRCRSRRRGVVDYKNGVVYAWVGFREKLKRIVESKYFNRGIMIAILVNTLSMGIEYH
EQPEELTDVLEISNIVFTSMFVLEMGFMLLAFGLFGYIRNPYNIFDSIIVIISVWEIIGQ
ADGGLSVLRTFRLLRVLKLVRFLPALRRQLVVLMKTMDNVATFCMLLMLFIFTFSILGMH
LFGCKFGLRTETGDTIPDRKNFDTLLWAIVTVFQILTQEDWNVVLYNGMASTSPWAALYF
VALMTFGNYVLFNLLVAILVEGFQAEGDANRSESDDEKKSDNFEEDEKVEQLRDTELKMY
SLMMTANGHVDPRGSMAPPIIMRTAATPMPTPKSSLGPDSVLGEELMYREGVPQYGEGGL
GVSQAGSSRAESRRGSSTSTTMDPLAFDQHSLNLSSPGRRSPLPTRSWGSRRSSWNSLGR
APSLKRRDTSGERESLLSGEGGEEEDAGMNKGEAGGNNRLRPDSLELLQASTLCPSIIAE
YGDCNGRTLTYDPTVNCDPKDDSSPEDDLDDDSSFCFWLKKEIRDMKPRWCKEHEDWNLY
LFSPESKIRGWCQSVISHKLFDHVVLVFIFLNCITIALERPDIQPHSTERKFLSVSNYVF
TVIFLAEMAIKVIALGFCFGKQTYLQSSWNVLDGLLVFVSLVDILVSLAYTGGNRILGIL
RVLRLLRTLRPLRVISRAPGLKLVVETLITSLRPIGNIVLICCAFFIVFGILGVQLFKGK
FYHCEGLDTKNITNKSDCLQANYRWIRRKYNFDNLIQALMSLFVLSCKDGWVNIMYDGLD
AVGVDQQPVRNHNPWMLLYFISFLLIVSFFVLNMFVGVVVENFHKCRQDQEEEEARLREE
KRLKMIEKKRRSKENEGAEAKQRPYYADYSPLRLSIHTLCTSHYLDLFITFIICINVFTM
SIEHYNQPQYLEEVLKYCNYVFTCIFIVEALLKLAAFGIHRFFKDRWNQLDIAIVALSIM
GITLEELKMSAALPINPTIIRIMRVLRIARVLKLLKMATGMRSLLDTVMQALPQVGNLGL
LFMLLFFIYAALGVELFGKLECNDNNPCEGLSRHATFENFGMAFLTLFRVSTGDNWNGIM
KDTLRECHPEDRHCLTYLPVVSPIYFVTFVLMAQFVLVNVVVAVLMKHLEESNKEAKEDA
EMDAEIALEMAMERQRKTSTTSSNSSAGGTYVGPCPNSPGEEEEVHYGDQDLLSLRKMSV
SRMHSLPNDSYMFRPVRPASAPYPLEEVELSPQHQHSGSVTSIHSQPCDSRTLLQVPDVS
PVHPRSPPTLTLPRIAPPTPSPSPRALRRQVAVKVDSMESQGCEHQERPNPVYLPPLSPS
PLSPHTSSPSPLPPPPPSSPSALSLPPCSPSAFPLPPPSPLHPLLSSPSPLPPPPSSPSL
LLPPPPSPRLPLRPPSLRRPRPPSAASLCDPADEEVYHITSSAHLRWGDEEGGGQESRGK
SGRSHSLSPYTALCSPNSSSTFSPPLPPLPPSTSRSALSLLGVGLTDRDFRKGLSADNKA
VLDKPPSLSAGHPEDHRRHSIEVCLPQAVITSDDQHFPREAHRSEKSGQGFPVRVQSVGG
GHRKKKMSPPCISIHPPSEKEHPHIASPPKLADCSMMLRRRTPSYDLTPHTQSNTQDASV
DSQTRTLTPIHVPLQAHSPTHTLTPSRGSTPTHTHTHTPPHASTPTLPNIPISPNIFIQP
HAPLVPMPFSQTHSLSPAARHSTLAGDYIPLPQFTFDQPQSRYMSGLSAGLSDADTATCS
SPFDNRLGSGAGFSAKNRRTAQ
NT seq
7629 nt
NT seq
+upstream
nt +downstream
nt
atgactgatggcgaggggagagcgcgctttcagtacgcagagtgcccggaggggcaggag
caagaggaggtgcacaaggaggtgaggctcgctataccgacggcctacagaaatgacgcc
ccgggtcatgatgttgaccctggaggaggtcacgacgaggaggaagcggaggaggtggag
aggagagggagcgtcacaggtcagggcagtggaggagaatggagtcctgaggttcaggag
gagcaggaagaccaagaaccggagctggaagtggaagttggaccaacattgggagttcgc
atcagggctcctattcgggatccagactgtgtctccgaggaggaggagcagcagccgtac
ccggccctggcccctgtggccttcttctgcttaaagcaaacaacaaggcctcgcaactgg
tgtcttcgagtcgtctgtaacccatggttcgagcatgtgtccatgctggtgatcctgctc
aactgcgtgactctggggatgttccagccctgtgaagatgtcagctgccagtcagagtgg
tgccgcatcctacaggtattggacgactgtatctttgctttctttgctgtggaaatggtc
atcaagatggtggccctggggatttttggctccaattgttacctcggtgacaagtggaac
cagctagactttgtcatcgtcatggcgggggtaatggagtattctctggatggccataac
gccagtctgtcagccatccgtaccgtccgagtgctcaggccactgagggccatcaacaga
gtaccaagtatgcggatcttggtgacattgctgttggacaccctacccatgctgggaaat
gtccttcttctctgcttctttgtctttttcatcttcgggattgttggagtccagctgtgg
gcggggctgctgcgcaaccgctgcttcttgggagaggacatcagaacaatgtacaacttg
tccataagtccttactacatgtcagaggagggtgaagacagcccattcatctgctctgct
ccccgcgagaacgggatgctgcgctgccacagtgtgccgcctcacacagagggtggggcc
gagtgctcattggccgctccccaccaaagctcagctctgattggatcagtgggtggggcc
agtgttaacggctgtgttaactggaaccagtactataatgtgtgtcgccccggggaccac
aaccctcacaagggagctgtcaactttgacaatatcggctacgcctggatagccatattc
caggtcatcacactggagggatgggtagatatcatgtactatgtcatggacgctcactcc
ttctacaattttatatattttatactgctcattatcgtgggctctttcttcatgatcaac
ttgtgcctcgtggtcatcgccacccagttttccgagacaaagcagagggagaatgctctg
atgagggagcagcgcgctcgctacatgtccaacgactccacgctcgccagctacagcgaa
ccaggctcgtgctacgaggagatgctacgctacatcagccacctttatcgcaaattcaca
cgcaggctgcagaggatatactctggatggcacagtaaacggcgtaaaaaggtgaatcct
aatggcagcagcggaggaagtaacggcgggggtaatggacatggccacagctccagcagg
acctgtggaggcttaggcccgggtagtgcattgtggctaagaccgatccacaaccttctg
cagcaccatcagcaccagcactgtcgcctcagcaacggggggcagcacaccatcaccgtg
acaaccgccgagcacacggacggagaaggaggggaggagctggagatgaagtctcttcct
gtccggagaggaagtacaaatggaaatagcggcggcagcgggggcaacccatctgttgtc
acccagggtatgggggcgttgctcgggcgactgaacggagggatgaactatccgaccatt
ctgccatcatttgtgtgcagctacagcagtaagacaccgccgccccactcccagcagtgt
ggacacagtccggagcagcacccaccgaaccacccagcatctgaacatgcagagacactg
aacaagctctaccagctcatgggacagcacagtcgccagaggctgctgtaccagctggca
ggcgtggtgcccagccctctgctcttggagctgctcagttgccctttgtgtgcccgcagc
ctggagaccttggagctggaactgggagacctggagggaggcagaggagaggctgatggg
ctgcacgacttcccccaggtcagactgcaagttggtggactaatgatgacggcgggggat
ctaagaggtgggcgatgtcggagcagacggcgaggggtcgtggattacaaaaatggagtg
gtttacgcctgggtaggcttcagggaaaagctgaagaggattgtggaaagtaaatacttc
aaccgagggatcatgatcgccatcctcgtcaatactctcagcatggggatagagtaccat
gaacagcccgaggagttgactgatgtgctagagatcagcaacattgtcttcaccagcatg
ttcgtcctggagatgggcttcatgctgctggctttcggcttgtttggatacatcaggaac
ccgtacaacatctttgacagcatcattgtgatcatcagtgtgtgggagataattggtcag
gcagacggtgggttgtcggtcttgcgaacatttcgtctgctgagggttctgaagctggtt
cgcttcctgcccgccctgaggagacaactggttgtgctgatgaagacaatggacaatgtg
gccacgttctgcatgctgctgatgcttttcatcttcactttcagtatactgggtatgcat
ctgtttggctgtaaattcggtcttcggacagagacgggagacaccatccctgaccgtaag
aactttgacacattgctctgggccatcgtcactgtattccagatccttacccaggaggac
tggaacgtggtgttgtataatggcatggcctcaacctctccatgggcagctctctacttc
gtcgctctgatgacattcggcaactatgtgctcttcaatttacttgtggccatcttggtt
gagggcttccaggctgagggtgatgctaatcgctcagagtcagacgatgaaaagaaatcg
gacaactttgaggaagacgagaaggtggaacagctcagagacactgagctaaaaatgtac
tcactgatgatgacagccaacggtcacgttgaccctcgaggctcaatggctcctccgata
atcatgcgcacagcagccacacccatgcccactcctaagagctctctgggaccggactct
gtcctcggagaggagctcatgtacagagagggggtgccccagtatggcgagggaggactt
ggggttagccaggcaggaagtagtcgtgcggagtctcgccgtggaagctccacctcaacc
accatggaccccttagcctttgaccagcattctctgaacctctcaagtcccggccgtcgc
tcccctcttcctacccgctcgtggggaagccgccgttccagctggaacagcctgggacga
gcgcctagcctcaaaaggcgagacaccagcggcgagagggagagcctgttgtcaggggaa
gggggagaggaggaagatgctggaatgaacaagggggaggcgggaggaaacaacagacta
cgtccagactccttggagctgctacaggcgtctacactctgcccttcgataatcgcggag
tacggtgactgtaatgggaggaccctgacctatgatcccaccgtgaactgcgaccccaaa
gatgactcctcgcctgaagatgacttggatgatgacagttctttctgcttctggttgaaa
aaagagattcgtgacatgaagccccgctggtgcaaagagcacgaagactggaatctgtat
ttgttctctccagagagcaaaattcgtgggtggtgccaaagtgtgatctctcacaaattg
ttcgaccatgtggttctggttttcatcttcctcaactgcatcaccattgccctggaaaga
cctgatatacagcctcacagcacggagcgaaagtttctgagtgtgtccaactacgttttc
actgtgatcttcctggcagagatggccattaaggttatcgctctcggtttctgcttcggg
aagcagacatacctccagtccagctggaatgttctagatggtttgttggtgtttgtgtct
ctggtcgacatcctggtctctctcgcctatactggcgggaacaggatcctgggcatcctc
agagtcctgcgcctgctacgaacactacgcccactgagggtgatcagccgagccccggga
ttgaagctggttgtggagacgctcatcacctctctcagacccatcgggaacattgtcctt
atctgctgcgccttcttcattgtgtttggcatcttgggggtgcagctgttcaaagggaag
ttctaccactgtgaaggtctggacacgaaaaacatcaccaacaagtctgactgtctgcag
gccaattaccgctggatacgaagaaagtacaactttgacaacctgattcaggctctgatg
tctttgtttgtgctgtcctgtaaggacggctgggtcaacatcatgtatgacgggctggat
gcagtaggagtggaccaacagcccgtaaggaaccacaacccctggatgctactctacttc
atctccttcctgctcatcgtcagcttcttcgtcctcaacatgttcgtcggcgtcgtggtg
gagaacttccacaagtgccggcaggaccaggaagaagaggaggctcgcttacgggaggag
aagaggctcaaaatgatagagaaaaagcgcaggagtaaggagaatgaaggggctgaggcc
aagcagaggccttactatgccgactactctcccctgcgtctgtccatccacacactgtgc
accagccactacttggacctctttatcaccttcatcatctgcatcaacgtcttcaccatg
agcattgagcactacaatcagccgcagtatttagaggaggtccttaagtactgtaactac
gtgtttacctgcatcttcatcgtcgaggccctgctcaaactcgcagcattcggcatacac
aggttcttcaaagacaggtggaatcagctggatatagctatagtggcgctgtccatcatg
ggcatcaccttggaggagctgaaaatgagcgcagcactgcccataaatcccaccatcatc
agaatcatgagagtactcagaatagcacgagtgctgaaacttctgaagatggccacaggg
atgcgatctctgctggatactgtcatgcaagcgctgccgcaggtgggaaatctcggcctc
ctcttcatgctgctcttcttcatctacgctgcacttggagtggagctctttggcaaactg
gagtgcaatgacaacaacccgtgtgagggtctgagtcgccacgcaacctttgagaacttt
gggatggccttcctcacactgttccgagtgtccactggagacaactggaatgggattatg
aaagacacgttaagggagtgtcatccggaagaccgccactgtctaacctacctgcccgtg
gtctctccgatttactttgtcacgttcgtgctcatggcccagttcgttctggtcaatgtg
gtggtggctgttttgatgaaacatctggaggaaagcaacaaggaggctaaagaggacgca
gagatggacgcagagatcgccttggaaatggcaatggagaggcaacgtaaaacaagcaca
acctccagcaacagttcagcaggagggacctacgttgggccgtgtccaaattcacctgga
gaggaagaagaggtgcactacggcgaccaggacctgctgtcgttaaggaagatgtctgta
tccaggatgcactctctgcctaacgacagctacatgttcagaccagtgcggccagccagc
gccccctatcctttggaggaggtagagctcagtccccagcaccagcattcaggctcagtg
acgtcgatccactcccagccatgtgatagtcgcacgctgctgcaggtaccagacgtttcc
cccgttcacccccggtcacctcccaccctcactctgccccgcattgccccgcccacgccc
agcccctccccacgggccctgcgcagacaggtggctgttaaagtggattctatggagtcc
cagggttgtgagcaccaggagaggcccaaccctgtctacctgcctcccctctccccttct
cccctctctcctcacacctcctccccatctcccctgcctcctcctcctccctcctctccc
tcagccctctctctcccaccctgctctccctctgccttcccactccctcctccatcccct
ctgcatcccctgctctcctctccgtctcctctccctcctccgccatcttccccctcgctt
cttctcccacctcctccctccccccgtctccccttacgccctcccagccttcggagaccc
agaccgccctctgctgcttccctgtgcgacccggcagacgaagaggtgtatcacatcacc
agctcggcccacctcaggtggggagacgaagagggaggagggcaggagagcagagggaag
agcggccgcagccactccctctccccgtacaccgccctgtgctctcccaactcttcctcc
accttctcccctcctcttcccccactaccaccttccacctcgaggagcgctctcagtctg
ctcggggtgggcttgacggaccgtgactttaggaagggtttaagcgctgacaacaaggcc
gtcctggacaagccgccgtcattgtctgccggtcaccctgaggaccatcgccgccactca
atcgaggtctgcctcccacaggctgtcatcaccagtgacgaccaacactttccacgtgag
gcccaccggtctgaaaaaagtggtcagggatttcctgtgagggtgcagtcagtcgggggc
ggccacaggaagaagaagatgagtcctccttgtatatccatccacccgccctcagagaag
gaacacccccacattgcctcacccccaaaactggctgactgcagcatgatgctgagacgc
aggacgccatcctacgacttgaccccgcacacacagtccaacacgcaagacgcctcggtg
gattcacagacgcggacgctcacacctatccacgtaccgcttcaagcacactcaccaaca
cacactctgacaccctcgcgggggtcaactccgacacacactcatacacacactccacct
cacgcgtccacacctacactcccaaacatcccaatcagcccgaacatctttatccagcct
cacgcacctctcgtcccgatgcctttctcacagacacactccctctcccccgccgcgagg
cactccactctcgcaggggactacatccccctcccccagttcaccttcgaccaaccacag
tccagatacatgagtggactgtcagctggcctatcagatgccgatacagccacctgctct
tcccctttcgacaacagactggggagcggcgcaggattcagtgcaaagaatcggaggacc
gcccagtga
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integrated database retrieval system
