Epinephelus fuscoguttatus (brown-marbled grouper): 125888628
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Entry
125888628 CDS
T08419
Symbol
exosc5
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
125888628 (exosc5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efo03019
]
125888628 (exosc5)
Messenger RNA biogenesis [BR:
efo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
125888628 (exosc5)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
125888628
NCBI-ProteinID:
XP_049432049
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All DBs
Position
LG5:34498135..34501687
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AA seq
222 aa
AA seq
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MSMMEVCGSPSVTLREFGCEQSLLSRPDGSASFIQGDTSVLAGVYGPAEVKISKEIYDRA
TLEVLIQPKVGLPSVKERSQEQCVRETCEASLLLSLHPRSSLTLILQLIHDDGSLLSCIL
NAACMALMDAGLPMSCLFCGVTCAIDADGQIIIDPTAAQEKESRALMTFAIDSTERRVIM
SSTKGSFSVLELQQCIAVSQKASEKIFQFYRDSVRRRYSKTL
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgagcatgatggaggtgtgcggatctccaagtgttactctgagagagtttggttgtgaa
cagagtttactgtctcgacctgacgggtcagcgtctttcattcaaggagacacaagtgtg
ttggctggagtgtacggaccagcagaggtcaaaatcagtaaagaaatctatgaccgggca
acgctagaagtgttgatacagcccaaagtgggactgccaagtgtaaaggagcggtcacaa
gagcaatgtgtgcgggaaacctgcgaagcatctctacttttgtcacttcatcctcgctcc
tccctcacactcattcttcagctgatacatgatgatggttcactcttgtcctgcattttg
aatgctgcctgtatggctcttatggatgcgggcctgcctatgagttgcctgttctgtgga
gtgacatgtgccatcgacgcagatggtcaaatcatcatagaccccactgcggctcaggag
aaggaaagccgagctttgatgacctttgctattgacagtacagaacgcagagtaattatg
tcatcaaccaaaggatctttttcagttcttgagctgcagcagtgtatagcagtcagtcag
aaagcatcagagaaaatctttcagttctacagagactcggtcaggcggcgatactccaaa
accctctga
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