Epinephelus fuscoguttatus (brown-marbled grouper): 125900762
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Entry
125900762 CDS
T08419
Symbol
scaf8
Name
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
KO
K13191
RNA-binding protein 16
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
efo03021
]
125900762 (scaf8)
03041 Spliceosome [BR:
efo03041
]
125900762 (scaf8)
Transcription machinery [BR:
efo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
125900762 (scaf8)
Spliceosome [BR:
efo03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
125900762 (scaf8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
Transformer
DUF3525
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
125900762
NCBI-ProteinID:
XP_049451928
LinkDB
All DBs
Position
LG14:complement(26598499..26629550)
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AA seq
1439 aa
AA seq
DB search
MEAVKAFNNELYSLNEYKPPISKAKMTQITKSGIKAIKFYKHVVQSVEKFIQKCKPEYKV
PGLYVIDSIVRQSRHQFGTEKDVFAPRFSKNIIATFQHLYRCPSDDKSKIVRVLNLWQKN
AVFKSDIIQPLLDMAAGIPPPSVTPVMPTSAAPVNNTTPGTPATPATPANIVQGLPDWAS
QITNTDTVAAVAQILQSPQGQQLQQLVQSLQMQQQQKPQPSLLQALDAGLVVQLQALTAQ
LTAAATANSLNPLEQRVSSFNKKLLGPFDFGNDSERGEESKKDSSSTQLPMVSEPINSSL
FHQLAEQLQQQNLEQFQKQLLEHQQHQQKAMNIEGQDSIFGQENSVATAQSSSQPQLPEP
DNKVDDSIDNQQQDMDLDEGPDGMEEEIFEAEEKKTVSARSRTRSRSRSRSPKRRRSRSR
SGSRKRKHRKRSRSRSRDRKRKSSRSYSSERRAREREKERQKKGLPPIRSKTLSVCSTTL
WVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYICMVHRQDAYRARQKLSTGSFKI
GSKIIKIAWALNKGVKQEYKQFWDVDLGVTYIPWEKVKVDDLDGFAEGGIIDQETVNDEW
EAAKNAEPAKEVTSQPVSTETTAASNTQTETFNQQVTMMPVQLPVAQAVPSAVGLVPPSF
PVTMGIPPPGYGPPPPFIRAGFNASQPPPGFMQAAQTAAMVSAATSLVQPSVVTSQEGVK
ESPFGAMIPPTSTIPGGFMAGVFNPVGVQAQQATNEKTSQSAEGMDAAAEITLQGMQNAV
RSGMGLLGMHPTASLTHQLHQSGLTGQRMPGLLPLDVRPNLLQPGAAARFPLLMQQGSVQ
QAAGLLESTLQAQARARAPFSQLDPFNRAPTLANENVSKTEDESSSGADEGKDQDYRFPP
MEKQSTGLLRTPPPEHREPLGGGGGAGGGGGGGGGRPPLLQTPGTQPARTSLVGRLQALA
GFTPDNRWNQTRGDFDERDGMRGGLQAPGGPKGFQEERPTPGQNFPNRFDNRPGTTAGAS
GVSGNAGAAGGPQAWNRSGGAAAPFDSELHQDLDERRRPWDRQRDRDERDFDFRREMNGN
RHSRERDRERERERDRERGRDRNREHDRDRDRDKERDRERERERGGWTPLLPLPTPLLPT
PPLNPNLTLNQGKLLAPLKLNPQIQTRFQSPLLPQAQAKPPLLGLNQPLPQVQIKSPPPS
QSQAAVAEPESETPASSETPQSQSPPSAQSPDRSSDNKGQSPLTEAPTQSESSPQRETPP
QTESPSQPMAQSPAQSPAQSPSKITTSPDTETPSQASPLVEASSQDSPVAFTRSVSPPEE
TTHSLEEQESPQKEEEEGEEGEEEEEESQERASSPQPRWVNGTGMDNGAVAESSPQASPE
LSPEPTEEPSPESVLPESEPEQQQEQLASPEDVDNEQSEPMEEAASQPVVDTVTDTEGT
NT seq
4320 nt
NT seq
+upstream
nt +downstream
nt
atggaggccgtcaaagcctttaacaatgagctgtactcattgaacgagtacaagccgcca
atctccaaggctaagatgacacagatcaccaagtctggaatcaaagctataaaattctac
aagcatgttgttcagagtgtggagaagttcattcaaaagtgcaaaccagaatacaaggtc
cctgggctgtacgtcatcgactcaattgtcagacagtcgcggcaccagtttggcacggag
aaggatgtttttgccccacgcttcagcaagaatatcattgcaacgttccagcacctgtac
cgctgcccttcggatgataagagtaagatagtgcgagtcctgaacctgtggcaaaagaat
gcggtcttcaagagtgacatcatccagcctctgttggacatggcagcaggaatcccccct
cccagcgtcacacctgtcatgcccaccagtgctgctccagtcaataacactacacctggc
accccagctaccccggctaccccagctaacatagtccagggtctgcctgattgggcttca
cagattaccaacacagacactgtggctgctgttgcacagatcctacagagtccccaggga
caacagctgcagcagctggtacagagtctacagatgcagcagcaacagaagccccagccg
tccctgctgcaggccttggatgccggtctggtggtgcagttgcaagctctaacagctcag
ctcactgctgccgctactgccaacagcctcaaccccctggaacagagggtctcctctttt
aataagaagcttctgggtccttttgattttgggaatgattcagaacgtggtgaagaatct
aaaaaggactcttcatcaactcagctgcctatggtgtcggagcccatcaacagctctctc
ttccatcagttggctgagcagctacaacagcagaacctggaacagtttcagaagcagctt
ttagagcaccagcagcaccaacagaaggcaatgaacatagaagggcaggactcaatcttt
gggcaagagaactcagttgcgactgctcagagcagcagccagccacagcttcctgagcca
gataacaaagtggatgactccatagacaaccagcagcaggacatggatctggatgagggc
ccagatggtatggaggaggagatctttgaggcagaggagaagaagactgtgagcgcacgc
tccagaacgcgctcaaggtcgcgctctaggtcgcccaagaggagaaggtccaggtcccgc
tctggctcacggaaacgtaaacaccgcaagcggtcacggtcacgctccagggaccgcaag
aggaagtcatcacggtcttactcaagtgaaagacgtgcccgagagcgagaaaaggagagg
cagaagaaaggactgcctcccattcgatccaagactctaagtgtgtgcagcacgactctg
tgggtgggtcaggtggacaaaaaggccacacagcaagacctcaccaacttatttgaagag
tttgggcagattgagtccataaatatgatccctccaagaggctgtgcctacatctgtatg
gtccacagacaggatgcgtaccgtgcccgccagaagctcagcactggctcctttaagatt
ggctctaaaatcatcaagattgcgtgggctctaaacaagggggtaaagcaggagtacaag
cagttttgggatgttgacctgggcgtcacctacataccttgggagaaggtgaaagtggat
gacctggatggctttgctgagggaggaatcatcgaccaggagactgttaatgacgagtgg
gaagcagccaagaatgccgagccagcgaaggaagttacaagtcagccagtaagcactgag
actacagcagcatctaacacccagaccgagaccttcaaccagcaggtcaccatgatgcct
gtacagctcccagttgcccaggctgttcccagtgcagtcggtttggtgccgcctagcttc
cctgtcaccatgggcatacccccgccaggctatgggccgccgccacccttcataagggct
ggcttcaatgcctcacagcctccgccaggtttcatgcaggcagcacagacagcagccatg
gtctcagcagctacttctctagtgcagccttcagtggtaaccagccaagaaggtgtcaag
gagtcaccatttggtgctatgattcctccaaccagcaccatccctggcggcttcatggcc
ggtgtgttcaacccagtgggagtccaagctcagcaagccaccaatgagaaaacatcacag
tctgcagagggtatggatgctgctgcagagattacactgcagggcatgcaaaatgcagtc
cgcagtgggatgggtctccttggcatgcaccccacagcttcgctcacccaccagcttcat
cagtctggtctgactgggcagagaatgcctggcctgctgcctctggatgtgcgacccaac
ctcctccaacctggggctgccgcccgtttcccactcctcatgcagcaagggtccgttcag
caggctgctggcctccttgaaagtaccctccaggctcaagctcgtgccagggctcccttc
tctcagctcgaccccttcaaccgggcccccaccctcgccaatgaaaatgtatccaaaaca
gaagatgagtcttcctctggagccgatgagggtaaagaccaggactaccgcttccctcca
atggaaaagcagagtacaggcctgttgagaacccctcctccagagcatagggagcccctt
ggaggtggtggtggagcaggaggtggtggagggggtggaggaggcaggcctcccttgctc
cagacccctgggactcagccagccagaaccagcctagtgggacgtctgcaggctcttgca
ggcttcactcctgataaccgctggaaccagaccagaggggactttgatgagcgagatggc
atgcgaggaggcctgcaggccccaggtggtccgaaaggcttccaggaggagcggcccaca
cctgggcagaacttccccaaccgctttgacaaccgccctgggacaacagcaggagcatct
ggggtttcgggcaatgctggagctgctggggggccacaggcctggaaccgtagtggtggt
gccgcagcaccttttgacagtgaactacatcaagacctagatgagcgaagacgcccttgg
gacaggcaacgagacagagatgaaagagattttgacttcaggagggagatgaatggtaac
cgccacagccgagagcgagatcgggaacgtgagagggagagagacagggagcgaggcaga
gaccgcaacagggagcatgaccgcgacagagaccgtgacaaagagagagaccgagagagg
gaacgtgaacgtgggggctggacacctcttctccccttgcctactcctctgcttccaact
ccacctcttaatcccaacctgaccctgaaccaaggcaaactgcttgcaccactcaaatta
aacccccagattcagacccgattccagtccccactcctgcctcaagctcaggccaaaccc
cctctcttaggtctgaatcagccgctgccccaagttcagatcaagtctccacctccatca
cagagccaagcagctgtggccgagcctgagtcagaaaccccagcttcgtctgagacacct
cagtcacagtcaccaccttcagctcaatcacctgaccggtcatctgacaacaaaggtcag
agcccattgactgaggctcccacccagtctgagtcgtcaccacagcgtgagaccccgcca
caaacagaatcaccatcccagcccatggctcagtccccggcccagtccccagctcagtcc
ccctccaaaatcaccacttctccagacactgagaccccaagccaagcctcaccactggtt
gaggcctcatcccaggactcacctgtggccttcacgcgatctgtcagcccccctgaagag
acgactcactctctggaggagcaggaaagtccgcagaaggaggaggaggagggggaggag
ggggaggaggaggaggaggagtcacaagagagagcctcctcacctcaacccaggtgggtc
aatggaactgggatggacaatggcgctgtggccgagtcttcacctcaggcctcccccgag
ctctctcctgagcccactgaagaaccctctcctgagtctgtgctccctgaaagtgaaccg
gagcagcagcaggagcagcttgcctctcctgaggacgtagacaatgaacagagtgagccc
atggaggaagctgcgagtcagccagtggtagacactgtcacagacactgaggggacataa
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integrated database retrieval system
