Epinephelus fuscoguttatus (brown-marbled grouper): 125901124
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Entry
125901124 CDS
T08419
Symbol
usp40
Name
(RefSeq) ubiquitin carboxyl-terminal hydrolase 40 isoform X1
KO
K11869
ubiquitin carboxyl-terminal hydrolase 40 [EC:
3.4.19.12
]
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
efo01002
]
125901124 (usp40)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
efo04121
]
125901124 (usp40)
Enzymes [BR:
efo01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
125901124 (usp40)
Peptidases and inhibitors [BR:
efo01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
125901124 (usp40)
Ubiquitin system [BR:
efo04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
125901124 (usp40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
YukD
Motif
Other DBs
NCBI-GeneID:
125901124
NCBI-ProteinID:
XP_049452493
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All DBs
Position
LG14:15163015..15180384
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AA seq
1299 aa
AA seq
DB search
MFGNLFEEEEEEGFSSTSSRGRVVKGGDEPPPPRGRSNLCGIKNQGGTCYLNSLLQTLLF
TPEFREELFKLGAEELGCLEDKEKPGSKVRVIPLELQRLFASLLLVDQQSASTADLTDSF
GWNSSEGTNQHDVQELNRILFSALEHSLVGTSGSTFIHQLYHGTIVNSIVCKECGNVSQR
QEDFLDLTACVCGVSSLEEALWNMFVEEELFEGNNLYRCAQCNKLVTAAKSAKLKKLPPF
ITMSLLRFSFDFAKCERYKETGRYSFPLSINLRPFCEETDGDDSDYSYELFSVIIHKGGC
YGGHYHVHIRDIDQLGQWEPTEEECKPKTQRKVKEEVKKMCEPKVQEDDPLSVLTAIIAQ
EPSKSVLLDQLGQKLMNKIGSSWSKKFRKHYGPIGKFLQSHSDIFMLVSNGTRVALKANP
PSPVTEPPGPAEQTTNSDPSTPSDPGAAEQQPEQDQKPECGQEQGSHWFDLNDSTVTSIR
ESDIEKQFQGKESAYMLFYRKTRLHRPSEALNNPQYKVPLNLIQMAQEENIKLQNMREEF
EATNNTIELHLHLAPSYRLENGALQPISKEQNGSTNLSFDRRKTVGDLRLAIYQMQELWE
GDMALTVARSLPAGLHLYNTLTDDGVSLYSAGICTNSDLFVWNGREVCGATVLTGAEWEP
VLLNVVRPFLGEDEGQEVEDGMECEEGRGGFENGEPGLKKEARGFAGAATLGEVREALGE
PEESLLCQEHKGGQRGEHEAGEGGGASGWRVFPPDDMQRTLKELSLKDGDALLVLEPQSF
DSSMFALNGDVVTVTTPSDCRWLQVEFRPLIGGGGEGEKEEERRKIKVPATGSMLLCEVK
QRAIEELQLQEQISGAQYCLRQVDCTGKLLPPVCEELSVRDAGVRLMTTLTLCPGNAPKA
SQLFLHFTVGMAPSAGMEMNIIVEKTCTVKECLKAMLDAVGLDGTCWHLRRLDWCEEVGE
PIMDEDASLSELKINNGETLVVTEGQLPPKGFLKLSVWLYLDPKNNSAVSQDFNHTDNGL
TEEQVPEVVTAGETQSHVPPLCAGNMELRSAGQVEISDEATLEDLKTQVLTLPALQDVCV
PTTAFMRVWQLEGWRLARILRGQQLTLKKLKLTSGTDLCVQQLLKEEDLGPKDVMLNVKM
GVPGERCFYPPEELVWDASRDSSPRSLRTCLAAHYGLSPDSLLLAKHQPDKHTWEEISNW
SQQISKKKKKRKAESLLGAPFHLKDGDTIGIKNLLIDNNRDFLTLEDERGQQRLREQAEE
RRKGGQAAGSDGAGPQKKTAPTKSRKPEVALSISVGEFR
NT seq
3900 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggaatctattcgaggaggaggaggaggaaggcttctcttccacctcctccaga
ggcagagttgtgaaggggggagacgagccacctccaccccgaggaagaagcaatctgtgc
ggcatcaagaaccagggtggcacctgctacctcaactctctgctccagaccctgctgttc
accccagagttcagagaggagctgttcaagctgggagcagaggaattaggatgcctggaa
gacaaagagaaaccagggtccaaagtcagagtgatccctctggagctgcagagactgttt
gccagtctgctgctggtggaccagcagagcgcctccaccgctgacctcactgacagcttt
ggctggaacagcagtgagggaacaaaccagcatgatgtgcaggagctgaacaggatcctg
ttcagtgccctggagcactctcttgtgggcaccagtggtagtacgtttatccaccagctg
taccatgggaccattgtcaacagcattgtctgcaaggagtgtggtaacgtcagccagaga
caggaggacttcctggacctgacggcatgtgtttgtggcgtgtctagcctggaggaggct
ctgtggaacatgtttgtagaggaagagttgtttgagggcaataacctgtaccgctgtgca
cagtgtaacaagctggtgactgctgccaagtctgccaagttgaagaagctccctccattc
ataaccatgtctttgctgagattcagctttgattttgccaaatgtgagcgatacaaggag
acgggacgctacagtttccccttaagcatcaacctacggccattttgtgaagagactgat
ggagatgactctgattactcctacgagctgttctctgtgattatccataagggcggctgc
tatggtggccattaccacgttcatatcagggacattgaccagcttggccaatgggagcca
acggaggaggaatgcaaacccaagactcagaggaaagtcaaggaggaggtcaagaaaatg
tgtgagccaaaagtacaagaagatgaccctttgtctgtcctcactgccattattgcccag
gaaccatcaaagagtgtcctcttggaccagctgggacagaaactcatgaataagattggt
tcatcctggagcaaaaagttcagaaaacactatggtcccataggaaagttcctgcagtcc
catagtgatattttcatgttggtgtccaatggtactcgagtggcactgaaggcaaacccg
ccaagccctgtgactgagccgcccggcccagcagagcagaccactaactccgatccttca
acaccttcagaccccggagctgctgagcaacagccggaacaagaccagaagccagagtgt
gggcaagagcagggtagccactggtttgatctgaacgactccacggtgacttctatcagg
gagtctgacatagagaagcagttccagggcaaagagagcgcgtacatgctgttctacaga
aaaacgcggctgcacaggcctagtgaagccctgaacaatccccagtataaagttcctctc
aacctcatccagatggctcaggaggagaacatcaaactgcagaacatgcgcgaggagttt
gaagccactaacaacaccattgagctgcatctgcacctggccccctcatataggctcgaa
aatggagccctgcagccaatcagcaaagagcagaatgggagcaccaatttgagtttcgac
cgcagaaaaactgtgggagatctcagattagctatttatcagatgcaggaactctgggaa
ggggacatggctctgactgtggccaggagtcttcctgcagggttacacctctacaacact
cttacagatgatggtgtgtccctgtacagtgcaggcatttgtacaaactctgatctgttt
gtgtggaacggcagagaggtttgtggtgcgactgtcctaactggagcagagtgggagcca
gtgctactaaatgttgtccgtccctttttgggggaagatgaaggtcaggaggtggaggat
gggatggagtgtgaggagggaagaggaggttttgaaaatggggaaccagggcttaaaaag
gaagccagagggtttgcaggtgctgcgaccctcggggaggtgagggaggcactgggggag
cctgaggagagtctgctgtgccaggagcataaaggaggacagagaggagagcacgaggca
ggagagggaggaggggcaagtggatggagggtgttcccacccgatgacatgcagcggacg
ctcaaggagctgtcgctgaaagacggagatgcactattggtgctggagccacagtccttc
gacagcagcatgttcgctctaaatggagacgtcgtcactgtgactacaccgtctgactgc
cgctggctccaagtggagtttcgaccacttataggaggaggaggagaaggggagaaagaa
gaggagaggaggaagattaaggttccagctacaggaagtatgctgctgtgtgaggtgaag
cagagggccatagaggagctgcagctacaggagcaaatctcaggtgcacaatactgtctg
aggcaggtggactgcacagggaaactccttcctccagtgtgtgaggagctgagtgttcgg
gatgcaggcgtgcgactcatgaccacactgactctctgtccgggaaatgcccccaaggca
tcacagcttttcttgcacttcactgtgggcatggcgccctctgctggcatggagatgaac
ataattgtggagaaaacttgtaccgtcaaagagtgtctaaaggcgatgctggatgccgtg
ggacttgatggcacctgttggcacttgaggaggctggattggtgtgaggaggttggagaa
ccaattatggatgaggatgcttctctgtcagagctgaagataaacaatggagagacatta
gtcgtcacagaaggacaacttcctccaaagggtttcctcaagctatctgtgtggctttat
ctggatcccaaaaacaactcagcggtttctcaggattttaatcacactgacaacggcctc
actgaggagcaagtgccggaggttgtgactgcaggtgaaacacaaagtcacgtacctcct
ctgtgtgctggcaacatggagctgaggagtgcagggcaggtggagatatcagacgaagcc
acgctggaggatctcaagactcaggtgttgacgctgccagcccttcaagatgtgtgtgtg
cccaccactgcgttcatgcgtgtgtggcagcttgagggatggaggctggcacgtatcctc
agaggacaacagctcacactcaagaagttgaagctgaccagcggcactgacctctgtgtg
cagcagctactaaaagaagaagatctgggccctaaagatgtgatgctgaatgttaaaatg
ggagtaccaggggagaggtgtttctaccctcctgaggagctggtgtgggatgcatcccgt
gactcttctccacgctctctacgcacttgtctggctgcacactacggcctctcccctgac
tctctgctgctggccaaacaccagccagacaaacacacctgggaggaaatctcaaactgg
agtcagcagatttccaaaaagaaaaagaagagaaaagcagaatcattactgggagcacca
tttcacctcaaagacggcgatacaatcggcatcaagaatcttttgattgataacaacagg
gacttcctcaccctggaggatgaacggggtcagcagaggctcagagagcaggcggaggaa
cgcaggaaaggagggcaggctgcaggctctgatggcgctggaccacagaagaagactgct
ccgaccaaatccaggaaaccagaggtagccctgtcgatcagcgttggggaattcagatag
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integrated database retrieval system
