Eptesicus fuscus (big brown bat): 103297064
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Entry
103297064 CDS
T09083
Symbol
COL1A1
Name
(RefSeq) collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04151
PI3K-Akt signaling pathway
efus04510
Focal adhesion
efus04512
ECM-receptor interaction
efus04611
Platelet activation
efus04820
Cytoskeleton in muscle cells
efus04926
Relaxin signaling pathway
efus04933
AGE-RAGE signaling pathway in diabetic complications
efus04974
Protein digestion and absorption
efus05146
Amoebiasis
efus05165
Human papillomavirus infection
efus05205
Proteoglycans in cancer
efus05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
103297064 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
103297064 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
103297064 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
103297064 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
103297064 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
103297064 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
103297064 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
103297064 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
103297064 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
103297064 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
103297064 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
103297064 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efus00536
]
103297064 (COL1A1)
Glycosaminoglycan binding proteins [BR:
efus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
103297064 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
TILa
Motif
Other DBs
NCBI-GeneID:
103297064
NCBI-ProteinID:
XP_008151928
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All DBs
Position
20:39878915..39895913
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AA seq
1460 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGIRYHDREVWKPEVCQICVCD
NGNVLCDDVICEDTKNCPGAVAPPGECCPVCPDGEVSPTDLETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSGGGVSVPGPMGPS
GPRGLPGPPGSPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER
GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGVPGQMGPR
GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGSRGSE
GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS
GAPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPAGLPGPP
GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP
GSPGPDGKTGPTGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP
GAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGAP
GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGSNGAPGNDGAKGDAGAPGAPGSQGAP
GLQGMPGERGAAGLPGPKGDRGDAGPKGADGAPGKDGVRGLTGPIGPPGPAGAPGDKGET
GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPAGPA
GPAGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE
GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGSDGPAGSPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGSSGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKSGDRGETGPAGPAGPIGPAGAR
GPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSPGAAGKDGLNGLAGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFMPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPTVAQKNWYVSKNPKEKKHV
WFGESMTGGFQFEYGGQDSDPADVAIQLTFLRLMSTEASQNLTYHCKNSVAYLDQQTGNL
KKSLLLQGSNEIELRSEGNSRFTYTVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAP
LDIGAPDQEFGMNVGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgacg
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
atccggtaccacgaccgggaagtatggaaacccgaggtctgtcagatctgcgtctgcgac
aatggcaacgtgttgtgcgatgacgtgatctgcgaggacaccaagaactgccccggcgcc
gtagcccccccgggcgagtgctgcccggtctgccccgacggcgaggtgtcgcctacggat
ctagaaaccgcaggagtcgagggacccaaaggagacaccggcccccgaggccccagggga
cccgcaggcccccctggccgagatggcatccccggacagcctggtcttcccggacccccc
ggaccccctggacctcctggaccccctggcctcggaggaaactttgctccccaaatgtct
tacggctatgacgagaaatctggtggaggagtttccgtgcccggtcccatgggtccttct
ggtcctcgtggtctccctggcccccctggctcacctggtccccaaggtttccaaggcccc
cctggtgagcctggcgagcctggagcttcaggtcccatgggtccccgtggtcctcctggc
ccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggcgagcgt
gggcctcctggacctcagggtgctcggggattgcccggaacagctggtctccctggaatg
aagggacacagaggtttcagtggtttggatggtgccaagggagatgctggtcctgctggt
cccaagggtgagcctggtagccctggtgaaaatggagttcctggtcagatgggcccccgt
ggtctgcctggtgagagaggtcgccctggagcccctggccctgctggtgctcgtggaaat
gatggtgctactggtgctgctggaccccctggtcccactggtcctgctggtcctcctgga
ttccctggtgctgttggtgctaagggtgaagctggtccccaagggtcccgaggctctgaa
ggtccccagggtgtgcgtggtgaacccggcccccctggccctgctggtgctgctggccct
gctggaaaccctggtgctgatggacagcctggtgctaaaggtgccaacggcgctcctggt
attgctggtgctcctggcttccctggtgcccgaggcccctctggaccccagggccccagc
ggtgcccctggccccaagggtaacagcggtgaacctggtgctcccgggaacaaaggcgac
accggcgccaagggagagcccggccccactggtattcaaggaccccctggccctgctgga
gaggaaggaaagcgaggagcccgaggtgaacccggacctgccggcctgcccggaccccct
ggcgagcgtggcggacctggtagccgtggcttccctggtgcagatggcgttgctggtccc
aagggccccgctggtgaacgtggctctcccggccctgctggccccaaaggctctcctggt
gaagctggtcgccccggtgaagctggtctgcctggtgccaagggtctgactggcagccct
ggcagccctggtcctgatggcaaaactggccccactggtcccgctggtcaagatggccgc
cccggacctccaggcccccctggcgcccgtggtcaggctggtgtgatgggattccctgga
ccgaaaggtgctgctggagaacccggcaaagctggagagcgaggtgttcccggacccccc
ggcgctgtgggtcctgctggcaaagacggagaagctggagctcagggagcccccggccct
gctggccctgctggtgagagaggtgaacaaggccctgctggctcccccggattccagggt
ctccctggccccgctggtcctcctggtgaagcaggcaaacccggtgaacagggtgctcct
ggagacctcggtgcccctggcccctctggagcaagaggcgagagaggtttccccggagag
cgtggtgtgcaaggtccccccggccctgctggtccccgcggatccaacggtgcccctggc
aatgatggtgctaagggtgatgctggtgcccctggagcccccggtagccagggtgcccct
ggccttcagggaatgcctggtgaacgaggcgccgctggtcttccaggccccaagggtgac
agaggcgatgctggtcccaaaggtgctgatggtgctcctggcaaagatggcgtccgaggt
ctgactggtcccatcggtcctcctggccctgctggtgcccctggtgacaagggtgaaact
ggtcctagcggccctgctggtcccactggagcccgtggtgcccccggagaccgtggtgag
cctggtccccctggccctgctggctttgccggcccccctggtgctgatggccaacctggt
gctaaaggcgaacccggtgatgctggtgctaaaggcgatgctggtcccgccggccctgct
ggccccgccggcccccctggccccattggtaacgttggtgctcctggacccaaaggcgcc
cgcggcagcgctggtccccctggtgctactggtttccctggtgctgctggccgcgtgggt
ccccccggcccctctggaaatgctggaccccctggccctcctggccctgctggcaaagaa
ggcggcaaaggcccccgtggtgagaccggccccgctgggcgtcccggtgaagttggtccc
cctggcccccctggccctgctggcgagaaaggatcccctggctccgacggacctgctggc
tcccccggaacccctggacctcaaggcattgctggacagcgtggtgtggtcggcctgccc
ggtcagcgaggagaacgaggcttccccggtcttcctggcccctctggtgaacctggcaaa
caaggtccttctggctccagtggcgaacgtggcccccctggccccatgggcccccctgga
ttggctggaccccctggcgagtctggacgtgagggatctcctggtgctgagggctccccc
ggacgagatggatctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc
ccgggtgctcctggcgctcctggtgcccctggcccagtcggccctgctggcaagagcggc
gaccgtggtgagactggtcctgctggtcctgctggccccatcggccccgccggtgcccgt
ggccccactggaccccaaggcccccgtggtgacaagggtgagaccggcgagcagggcgac
agaggcatcaagggtcaccgtggtttctccggcctccagggtccccctggcccccctggc
tctcctggtgagcaaggtccctctggagcttctggtcccgctggtccccgtggtcccccc
ggctctcccggtgccgctggcaaagatggtctcaacggtctcgccggccccatcggaccc
cctggtccccgcggtcgcactggtgatgctggtcctgttggtccccccggccctcccggc
cctcctggtccccctggtcctcccagcggcgggttcgacttcagcttcatgccccagcca
cctcaagagaaggcacacgatggtggccgctactaccgggccgatgatgccaacgtggtc
cgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccccgaaggcagccgcaagaaccccgcccgcacctgccgcgacctcaagatg
tgccactccgactggaagagcggagaatactggattgaccccaaccaaggctgcaacctg
gacgccatcaaggtcttctgcaacatggagaccggcgagacctgcgtgtaccccacgcag
cccaccgtggcccagaagaactggtacgtcagcaagaaccccaaggagaagaagcacgtc
tggttcggcgagagcatgaccggcggattccagttcgagtacggcggccaggactccgac
cccgccgacgtggccatccagctgaccttcctgcgcctgatgtccaccgaggcctcccag
aacctcacctaccactgcaagaacagcgtggcctacctggaccagcagacaggcaacctc
aagaagtccctgctcctccagggctccaacgagatcgagctccggtccgagggcaacagc
cgcttcacctacactgtcacctacgacggctgcacgagtcacaccggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgcctgcccatcatcgatgtggccccc
ttggacattggcgccccagaccaggaattcggcatgaacgttggccctgtctgcttcctg
taa
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