Eptesicus fuscus (big brown bat): 103300290
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Entry
103300290 CDS
T09083
Symbol
COL20A1
Name
(RefSeq) collagen alpha-1(XX) chain
KO
K24357
collagen type XX alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
103300290 (COL20A1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
fn3
VWA
VWA_2
Pur_ac_phosph_N
VWA_3
YjeF_N
Motif
Other DBs
NCBI-GeneID:
103300290
NCBI-ProteinID:
XP_054580208
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Position
12:complement(720002..742095)
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AA seq
1290 aa
AA seq
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MGAQVHPHLGVCLWLWLGVTLGLGPEQANGHLQLAVLPEDQLQIKWTESQGRGLGYLVQV
KPVAGDVEQEVMLTTKTPKATVGGLSPSKGYTLQIFELTGSGNVLLAQREFVIEDLRSHS
VSRSSWRPLGAALEPTPSHTGSPDPDPPVILAPSQDPPTLAGLQFHCMPPTPADMIFLVD
GSWSIGHSHFQQVKDFLASIIEPFEIGPDKVQVGLTQYSGDPKTEWDLNTFSTKEEVLAA
VHSLHYRGGNTFTGLALTHVLEQNLKPAAGPRPEAAKVVILVTDGKSQDDARAAGRILKS
LDVDIFAVGVKNADEAELRLLASPPLDITVHSVQDFPQLSTLAGLLSRLVCQQVQSRSPR
PGPAATPALDPLSAPTSLVLTQVTSSSVHLSWTPALQRPLKYLVVWRPSRGGARREVEVD
GPSTSMELHGLTSGTEYLLSVFPMYEAGVGEGLRGLVTTVPLPPPQALALATVTPRTIRL
TWQPSAGATQYLVRYSLASPQGKEEGREVRVGQPEVLLGSLEPGRDYDIWVQSLQGAQAS
EARGIHARTPPLAPPRPLIFSDVSHDSARVSWKGTLRPVQLFRVSYLSSKGSHSGQMEAP
GNATSVTLGPLSSSTTYTIRVTRLYPGGGSSTTTGRLTTRKVPSPSQLSVTELPGGEVQL
AWAAAAASGVLVYQIKWTPLGDGKAHEISVPGSLRTAVLPGLGAHLEHEITILAYFRDGA
HSDPVSFHYSPRTVSRSPPSNLTLTSESPNSLLVSWTPPTGHVLHYRLTYTLALGSGPEK
SVSVPGPRSHVMLPGLLAATKYRVLVSAVYGAGESMAVTATGRTACPALRPDGSLAGFDL
MAAFGLVEREYASIRGVAMEPSAFGSTRTFTLFRDAQLTRRASDIHLAALPPEHTVVFLL
RLLPDTPREAFALWQMTTEDFQPALGVLLDAGRKSLTYFSHDPRAALQEVTFDLPEVRRI
FFGSFHKVHVAVGHSKVRLYVDCRKVAERPIGEAGSPPAAGFITLGRLAKARGPRSSSAA
LQLQILQIVCSDTWAEEDRCCELPALKDGETCPAFPPACTCSSQTPGPPGPRGPPGLPGR
NGASGQQGFPGPRGPPGVKGEKGDHGLPGLQGYPGHQGDPGEAGLQGPKGMRGLEGTTGL
PGPPGPRGYPGMVGARGTSGERGPPGTVGPTGLPGPKGERGEKGEPPSLAAIYQLVSQAS
HVLKFDSFFHKSTRPPMPILEAPGPLVTPSEARLPGEGGNGGFHPEDRGAPAALAQVGSP
QPHGSKIPGSLEGAGESGPGRGGPSPCRLE
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcccaggtgcacccccacctaggggtctgcctctggctgtggctgggtgtcacc
ctgggacttggcccagaacaagcaaacggccacctgcagctagctgtgctgcccgaggac
cagctgcagataaagtggacggagtcgcaggggcgtggccttggctacctggtgcaggtg
aagcccgtggcaggggacgtggagcaggaggtgatgctgaccaccaagacccccaaggcc
acagtcgggggcctgagcccctccaaggggtacaccttgcagatctttgagctcaccggc
tcagggaacgtcctgctggctcagagggagtttgtgatcgaggatttgaggagtcactct
gtgagcaggagcagctggaggcccctgggggcagctctggagcccacaccttcccacacg
gggagcccagaccctgaccccccagtcatcttggccccaagccaagacccgcccactctg
gctggcctccagttccattgcatgccccccacacccgccgacatgatcttcctagtggac
gggtcttggagtattggccacagtcacttccagcaggtcaaagacttcctggccagcatc
atcgagccctttgaaattgggccggataaagtccaagtaggcctgacccagtacagtgga
gaccccaagaccgagtgggacctgaacaccttcagcaccaaggaggaggtgttggcagcc
gtgcacagcctccattacagagggggaaacacgttcacaggcctggccctgacccacgtg
ttagagcagaacctgaagcctgcagcaggtccccgtccagaggcagccaaggtggtgatt
ctagtgacggatggcaagtcccaggacgatgcccgtgctgctggccgcatcctcaagagc
ctggatgtcgacatctttgctgtgggtgtgaagaatgctgatgaggctgagctgaggctc
ctggcgtccccgccgctggacatcaccgtccacagcgtgcaggacttcccccagctcagc
acactggccggcctgctcagccgcctcgtttgccagcaggtccagagcaggagcccacga
ccgggcccagcagccactccagccctggaccccctctccgctcccaccagcctcgtcctg
acccaggtgacctcctccagcgtccacctgtcctggactccagccctgcagcggccgctc
aagtacctggtggtgtggcggccttctaggggtggggcccgccgggaggtggaggtggac
gggcccagcacgtccatggagctgcatggcctgacctccggcacagagtacctgctgtct
gtgttccccatgtacgaggcgggggtgggtgagggcctgcggggcctggtgaccacagtg
cctctgcctccgccccaggcactcgccctggccacagtgactcccaggaccatccgcctc
acctggcaaccctcagcaggggccacccagtacctggtgcggtactcgctggcctccccc
cagggcaaggaggagggcagagaggtgcgggttgggcagccagaggtgctgctgggtagc
ctggagccgggcagggactacgacatctgggtgcagagcctgcaaggtgcacaggccagt
gaggctcggggcatccacgccaggacccctcccctggctccccccagacccctgatcttc
tcagacgtgagccatgactcagcccgtgtgtcctggaagggcaccctgaggccggtgcag
ctgttcagggtcagctacttgtccagcaagggcagccactcggggcagatggaggctcct
ggcaatgccacctcagtcactctgggccctctctcctcctccaccacctacaccatccgt
gtcacccgcctctaccctgggggcggctcctccaccacgactggccgcctgacgacacgg
aaagtccccagcccgagccagctgtccgtgacagagctccctgggggtgaggtccagctg
gcgtgggcggctgcagcggcgtccggtgtgctggtctaccagatcaagtggacacctctg
ggggatgggaaggcccatgagatctccgtcccagggagcctgcgcacagccgtccttccc
ggcctgggagcgcacttggagcacgagatcaccatcctggcctacttcagggacggggcc
cacagcgaccccgtgtccttccactacagcccccgtacagtcagccggagcccaccctcc
aacctgaccttgacttctgagtcaccaaacagcctactggtcagctggacgccccccact
ggccacgtcctccactaccggctcacgtacacgctggccttgggctctggaccagagaaa
tcagtctctgttccaggacccaggagccatgtgatgctccctggcctgctggcagccacc
aagtaccgagtcctggtctcagcggtgtatggagcaggggagagtatggcagtgactgcc
acaggccgaacggcctgcccagccctccgcccagatggctcccttgcaggctttgacctc
atggcggccttcgggcttgtggagagggagtacgcctccatccgcggtgtggccatggag
ccctctgcgtttggctcgaccaggaccttcacactcttcagggatgctcagctgacacgc
cgagccagcgacatccacctggccgccctcccgcctgaacacacagtcgtcttcctcctg
cgcctcctccccgacacgccccgcgaggcctttgcgctgtggcagatgacgactgaggac
ttccaacctgccctcggggtcctgctggacgcaggcagaaagtccctgacctacttcagc
cacgaccccagggcggccttgcaggaggtgacctttgacctgcccgaagtgagaaggata
ttcttcgggagcttccacaaggtgcacgtggccgtgggacactccaaggtccggctctac
gtggactgtaggaaggtggccgagaggcccatcggggaggcgggcagccctcctgccgcc
ggcttcatcacgctggggaggctggccaaggcccggggcccccggagcagctcggctgcg
ctccagctgcagatactgcagatcgtgtgcagtgacacctgggcagaggaggacaggtgc
tgcgagctccctgcgttgaaggatggggagacctgccctgccttccctcccgcctgcacc
tgctcctcgcagacacctgggcccccgggaccccgagggcctccaggcctccctggcagg
aatggagcctcaggacagcagggcttcccagggcccaggggtcctccaggggtcaaagga
gagaagggggaccatggactcccgggcctgcagggttaccccggccaccagggcgacccc
ggggaggctggcctccagggtccaaagggcatgagaggcctggagggcaccactggcctg
cccggaccccctggacctaggggctacccaggcatggtgggagccagggggaccagtggg
gagcgaggacccccagggactgtggggcccacgggtctgcctgggcccaagggggagcga
ggagagaagggcgagccaccgtccttggccgccatctaccagctggtgagccaggcctcg
catgtgctgaagtttgactccttcttccacaagagtaccaggccccccatgcccatcttg
gaggcccctgggcccctggtcacacccagtgaggcccggctccctggagaagggggaaat
ggtggcttccaccctgaagacagaggtgcgcccgcagccctggctcaggtgggcagccct
cagccacacgggagcaagattccaggatccttggaaggagcaggggagtccggcccgggg
agaggaggcccttctccctgccgcctggagtga
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