Duffyella gerundensis: EM595_0726
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Entry
EM595_0726 CDS
T04258
Symbol
ddlB
Name
(GenBank) D-alanine:D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
ege
Duffyella gerundensis
Pathway
ege00470
D-Amino acid metabolism
ege00550
Peptidoglycan biosynthesis
ege01100
Metabolic pathways
ege01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
ege00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
EM595_0726 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EM595_0726 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
EM595_0726 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ege01011
]
EM595_0726 (ddlB)
Enzymes [BR:
ege01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
EM595_0726 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
ege01011
]
Precursor biosynthesis
Amino acid ligase
EM595_0726 (ddlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
ATP-grasp_4
CPSase_L_D2
ATP-grasp_3
ATP-grasp
ATPgrasp_ST
TTL
Motif
Other DBs
NCBI-ProteinID:
CUU22962
UniProt:
A0A0U5GJA3
LinkDB
All DBs
Position
1:815009..815929
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AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLNSGNAVLAGLKEAGIDAHAVDIRDVPVWQLKEQGYHKAFI
ALHGRGGEDGTLQAALEFLNIAYTGSGVMASAISMDKLRTKLLWQGAGLPVSPYIMLSRS
EWDAGLTEETTAKISALGLPLFVKPSREGSSVGISRVNEQEALPAALDNAFLHDDEVLIE
QFLSGAEYTVSIVGETLLPSIRIQTANTFYDYEAKYHSDETQYFCPSGLSAEREAELAAI
VLKAWRVLGCSGWGRVDVMMDGAGNFHLLEVNTSPGMTSHSLVPMAAKQAGMSFSALAAR
ILELAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagtcgcagtattgctgggtggaacgtctgcggagcgcgaagtttctctt
aactccggtaacgcggtgctcgctggcttaaaagaagcgggtattgatgcgcatgcggtt
gatattcgcgatgtgccggtatggcaactgaaagagcagggctatcacaaggcgtttatc
gctcttcacggacgcggtggcgaagatggcacgctgcaggcagcgctggaatttctgaac
attgcttacaccggcagcggcgtaatggcatcggcgatcagcatggacaagctgcgcact
aagttgttgtggcagggtgccgggttgccggtatcgccttacattatgctgtcgcgcagt
gagtgggacgcaggcctcaccgaagagaccacggcaaaaatttctgcgctgggcttgccg
ctgtttgttaagccgagccgcgaaggatcaagtgtcggtatcagccgggtaaacgagcag
gaggcactgccagcggctctcgataatgcatttttgcatgacgatgaagtgctgattgag
caatttctgagcggtgcggaatataccgtcagcattgtgggtgagacgctgctaccttct
attcgtatccagactgctaatacgttttatgactatgaagccaagtatcattctgatgaa
acgcaatatttttgcccaagtggcttatcggctgaacgcgaagcggaactggcagcgatc
gtgctgaaagcctggcgcgtgctcggttgtagcggctggggccgggttgacgtcatgatg
gacggcgctggcaattttcatctgctggaagttaacacgtcgcccggtatgaccagccat
agtctggtaccaatggcggcaaaacaggcaggaatgagtttctccgcgctggccgcccgt
attctggagttggccgactga
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