Sinorhizobium garamanticum: PZN02_001478
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Entry
PZN02_001478 CDS
T09001
Name
(GenBank) 2-oxoglutarate dehydrogenase E1 component
KO
K00164
2-oxoglutarate dehydrogenase E1 component [EC:
1.2.4.2
]
Organism
egi
Sinorhizobium garamanticum
Pathway
egi00020
Citrate cycle (TCA cycle)
egi00785
Lipoic acid metabolism
egi01100
Metabolic pathways
egi01110
Biosynthesis of secondary metabolites
egi01120
Microbial metabolism in diverse environments
egi01200
Carbon metabolism
egi01210
2-Oxocarboxylic acid metabolism
Module
egi_M00009
Citrate cycle (TCA cycle, Krebs cycle)
egi_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
PZN02_001478
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
PZN02_001478
Enzymes [BR:
egi01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.4 With a disulfide as acceptor
1.2.4.2 oxoglutarate dehydrogenase (succinyl-transferring)
PZN02_001478
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Paralog
Gene cluster
GFIT
Motif
Pfam:
E1_dh
OxoGdeHyase_C
Transket_pyr
2-oxogl_dehyd_N
Motif
Other DBs
NCBI-ProteinID:
WEX88950
LinkDB
All DBs
Position
1:1585794..1588790
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AA seq
998 aa
AA seq
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MTRQEANEQFQLTSFLDGANAAYIEQLYARYEADPSSVSSEWQSFFKALADRPEDVVKAA
KGASWKKSNWPIAANGELVSALDGDWGVVEKVIEKKVKAKVEEAAAVTGVPVSEAEVHQS
TRDSVRAIMMIRAYRMRGHLHAKLDPLGLADPVEDYEELSPKTYGFEEKDLDRKIFIDNV
LGLEYATVREMVEILERTYCSTMGVEFMHMSNPEEKAWIQARIEGPDKGVEFTPEGKRAI
LQKLIESEGFEQFIDVKYKGTKRFGLDGGESLIPALEQIIKRGGQEGLKEIVLGMAHRGR
LNVLSQVMAKPHRAIFHEFKGGSYAPDDVEGSGDVKYHLGASSDREFDGNKVHLSLTANP
SHLEIVNPVVMGKARAKQDQMATVFEGDIIPLRERVKVMPLLLHGDAAFAGQGVIAEILG
LSGLRGHRVAGTVHFIINNQIGFTTNPAFSRSSPYPSDVAKMIEAPIFHVNGDDPEAVVY
AAKVATEFRMKFHKPVVVDMFCYRRFGHNEGDEPAFTQPRMYKAIRAHKTVVQLYSERLI
AEGLMTEGEVEKMKADWRAHLEQEFEAGQSYKPNKADWLDGAWSGLRTADNQDEQRRGKT
SVPMKQLKEVGRKISEIPAGFNAHRTIQRFMENRASMVQTGEGIDWAMAEALAFGTLVTE
GTKIRLSGQDCERGTFSQRHSVLYDQQTEERYIPLANLSPTQARYEVINSMLSEEAVLGF
EYGYSLARPNALTLWEAQFGDFANGAQVVFDQFISSGERKWLRMSGLVCLLPHGYEGQGP
EHSSARLERFLQLCAEDNMQVANVTTPANYFHILRRQVKRDFRKPLILMTPKSLLRHKRA
VSSLSEMAGESSFHRLLWDDAEVIKDGPIKLQKDSKIRRVVMCSGKVYYDLLEEREKRGV
DDIYLLRVEQLYPFPAKALINELSRFRNAEMVWCQEEPKNMGAWSFIDPYLEWVLAHIDA
KYQRVRYTGRPAAASPATGLMSKHMAQLAAFLEDALGG
NT seq
2997 nt
NT seq
+upstream
nt +downstream
nt
atgacaaggcaagaggccaacgagcaattccagctcacatcgtttctggatggcgccaat
gctgcttatatcgagcagctctatgcgcgttacgaagcggatccgtcctccgtttcgtcc
gaatggcaatccttcttcaaggcgctcgccgaccggccggaagacgttgtgaaggccgcc
aagggcgcctcctggaaaaaaagcaactggccgatcgccgccaatggcgaactcgtgtcc
gcgctcgacggcgactggggcgtcgttgagaaagttatcgaaaagaaggtcaaggccaag
gtcgaggaagctgctgccgtcaccggtgtcccggtcagcgaggcggaggttcatcagtcg
acgcgcgattccgtccgcgccatcatgatgatccgcgcctaccgcatgcgcggccacctg
cacgccaagctcgatccgctcggccttgccgacccggtcgaggactacgaagagctctcg
ccaaagacctacggcttcgaagagaaggacctcgaccgcaagatcttcatcgacaacgtg
ctcggcctcgaatacgcgaccgtgcgcgaaatggtcgaaatcctcgagcggacctactgt
tcgacgatgggcgtcgaattcatgcatatgtccaaccccgaggagaaggcctggatccag
gcccgtatcgaaggtccggacaagggcgtcgaattcacgcccgagggcaagagggcgatc
ctgcagaagcttatcgagtccgaaggcttcgagcagttcatcgatgtcaagtacaagggc
acgaagcgtttcggcctcgacggcggcgagtcgctgatcccggcgctggagcagatcatc
aagcgcggcggtcaggaaggcctcaaggaaatcgtgctcggcatggcccaccgcggccgc
ctcaacgttctttcccaggtgatggccaagccgcatcgcgccatcttccacgagttcaag
ggcggctcctatgcgcccgatgacgtggaaggttctggcgacgtcaaatatcacctcggc
gcttcctccgaccgcgaattcgacggcaacaaggtgcacctgtcgctgacggcgaacccg
tcgcatctcgagatcgtcaacccggtcgtcatgggcaaggcacgcgccaagcaggaccag
atggcgacggtgttcgagggcgacatcattccgctgcgcgaacgcgtaaaggttatgccg
ctcctgctgcatggcgacgctgccttcgccggccagggcgtcatcgcagaaatcctgggc
ctctctggcctgcgcggccaccgcgtcgccggtaccgtgcacttcatcatcaacaaccag
atcggcttcaccacgaacccggccttctcgcgctcctcgccctatccgtcggacgtggcg
aagatgatcgaagcgccgatcttccacgtgaacggcgatgacccggaagccgtcgtctac
gcggccaaggtcgcgaccgaattccggatgaagttccacaagccggtcgtcgtcgacatg
ttctgctaccgccgcttcggccacaacgagggcgacgagccggcattcacgcagccgagg
atgtacaaggccatccgcgcccataagacggtcgtccagctctattcggaacggctgatc
gccgaaggtctcatgaccgagggcgaggtcgagaagatgaaggcggactggcgcgcccat
ctcgagcaggagttcgaggccggccagtcctacaagccgaacaaggccgattggctcgat
ggagcctggtcgggcctgcgcacggccgacaaccaggatgagcagcgccgcggcaagacc
tcggtaccgatgaagcagctgaaggaagtcggccgcaagatttccgagatcccggctggc
ttcaacgcccaccgcacgatccagcgtttcatggaaaaccgtgccagcatggtgcagacc
ggtgagggcatcgactgggcaatggcggaagcgctcgccttcggcacgcttgtcaccgag
ggcacgaagatccgcctctcgggccaggactgcgagcgcggcacgttctcgcagcgtcac
tcggttctttatgaccagcagacggaggagcgctacattccgctcgccaacctgtcgccg
acccaggctcgctacgaggtcatcaactcgatgctctcggaagaggcggtgctcggcttc
gaatatggctattcgcttgcccgtccgaacgcactgacgctgtgggaagcccagttcggc
gacttcgccaacggtgctcaggtggtcttcgaccagttcatctcgtccggcgaacgcaag
tggctgcgcatgtccggcctcgtctgcctgctgccgcacggctatgaaggccaggggccg
gagcactcctccgcgcgcctggaacgcttcctgcagctctgcgcggaagacaacatgcag
gtcgccaacgtcaccacgccggccaactacttccacatcctgcgccgccaggtgaagcgc
gatttccgcaagccgctgatcctgatgacgccgaagtcgctgctccggcacaagcgggcg
gtctccagcctctccgaaatggcgggcgagagttccttccaccggctgctctgggacgat
gcggaggtcatcaaggacggcccgatcaaactgcagaaggattcgaagatccgtcgcgtc
gtgatgtgctcgggcaaggtctattacgacctgctcgaggagcgcgagaagcgcggtgtc
gacgacatttacctgctgcgcgtcgagcagctctatccgttcccggccaaggctctgatc
aacgaactcagccgcttccgcaatgcggaaatggtctggtgccaggaagagccgaagaac
atgggcgcctggtcgttcatcgatccctatctcgaatgggtgctcgcccatatcgacgcc
aagtatcagcgggtgcgctacaccggccgtccggccgccgcttcgccggcaaccggcctg
atgtctaagcacatggcgcaacttgccgccttcctcgaggacgcgctggggggctga
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