Echinococcus granulosus (hydatid tapeworm): EGR_06729
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Entry
EGR_06729 CDS
T05553
Name
(RefSeq) RNA pseudouridylate synthase domain-containing protein 4
KO
K22538
mitochondrial RNA pseudouridine synthase RPUSD4 [EC:5.4.99.-]
Organism
egl
Echinococcus granulosus (hydatid tapeworm)
Brite
KEGG Orthology (KO) [BR:
egl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egl03016
]
EGR_06729
03029 Mitochondrial biogenesis [BR:
egl03029
]
EGR_06729
Transfer RNA biogenesis [BR:
egl03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EGR_06729
Mitochondrial biogenesis [BR:
egl03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Other mitochondrial DNA transcription and translation factors
EGR_06729
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
LRR_8
LRR_4
Motif
Other DBs
NCBI-GeneID:
36342444
NCBI-ProteinID:
XP_024349638
LinkDB
All DBs
Position
Unknown
AA seq
703 aa
AA seq
DB search
MAAKTLTKLLKQPPIHGKGQSCRQMPKKVIRSSEEEVTSGEGSYIDSLFFEPLPKVPKKV
MWDDPTEVPITLDVEENGYIDQSYFQEPKTCEASDLDGTESVADCIAGVREQLSINQFSG
GRLDFKYREKRDSRVRYDSQGFRIPDDNPIKFHLLTEDEAVEVLYKSIIAVQENLIVINK
PPGIACHGGQGQYFSVDSLLPRLAHKLRRESYSESTALKLTHRIDKEATGILLISRNQDT
HLKLTEAFANRWISKSYLCITSGIPREKEGTIYLPISEKQINGVYRMVARCPRPKLPVDG
DVLRDEVEEDEWLQRIRRTTNAITHFNVLDRRNDAALLECSSVTGMRHQIRVHLSAALET
PILGDHKYAHFGYLAPQRLSKRTLEALEIRQSKARYLGLYLHAHSVKFGGVTDTAITPSS
APPSQPPPGFFAFLSRERPREVRQFVAPLPSFFLTTLNCLGIRIPQTLRWTREDVEMENV
RAARRILAERIGVWCTERRGGPPLHCLTQLELETAGLRALPPPQVLGALPCLRVLNLGGN
KLRCLCGGLLQCRCLEELNLDDNYLTSIRGELRNLHCLRVLSETVNELKRMHRIEVVDLR
KNQVCNDSNYALLMWRMLPSLSLLDGRGKFQDSVSFTAVNLPRKQEATNIRKKKAISGPK
ICERFHRGQLRKVYLSEVIQTAKQESSEYPISGKVILGTCSKL
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atggcggccaagaccctaacaaaactactaaaacaaccgcccatccatggcaaaggtcag
tcttgccgtcaaatgccgaagaaagttattagaagtagtgaggaggaagtcacatcgggt
gagggatcatacattgacagcttgttttttgaaccgcttccgaaggtccctaagaaagtg
atgtgggatgatcctactgaggtaccgatcacgctcgacgtggaggagaatgggtatatc
gatcaatcctacttccaagaaccgaagacatgcgaggcttctgatttggatggcactgag
agtgtcgccgattgcattgctggtgtccgcgaacaactgtctatcaaccaatttagtggt
ggaagacttgacttcaagtaccgagaaaaacgggattctagagtgcgatacgattctcag
ggattccgtatacccgacgataatcccatcaaattccatcttctcacagaggacgaggcg
gtcgaggttttgtacaaaagcatcattgccgttcaagaaaacttaattgtgatcaacaaa
ccaccaggaatagcttgccatggtggccaaggtcagtatttcagcgtggacagtcttctt
ccaagattagcccataaacttcgtcgcgaatcctacagtgagagcactgctcttaaactg
actcacagaatcgacaaggaggcaaccggtatactccttatctcaagaaatcaagacaca
catcttaagttgactgaagcatttgccaaccgctggatcagtaagtcctacttgtgtatc
acatcaggcatcccacgcgaaaaagagggcaccatttatttgcctatatcagagaaacaa
atcaatggtgtgtaccgaatggtcgcgcgttgcccacgtcccaagttaccagtagacggt
gatgtcttgagggatgaagtggaagaggatgagtggcttcagagaatacgtaggacgacc
aacgccattactcacttcaacgtacttgacaggcgtaatgatgcagctcttctggagtgc
tcctcggtgacaggtatgaggcatcaaattcgtgttcatttgagtgcagcgctggagaca
ccgattttaggagatcacaagtacgcacattttgggtatctagcgcctcaacgcctgtcc
aaacgaactcttgaagcactggagatacgccagtcgaaggcacgttacctgggcctatac
ctgcacgcgcacagcgtcaaattcggcggtgtcactgacacagctatcactccttcatct
gcccctccgtctcagcctccgccgggtttcttcgcctttttgagccgagagcgaccacgc
gaggtgcgccagttcgtcgctcccttgccttccttcttcctcaccaccctcaactgtctc
ggcattcgcattccccaaacactgcgctggacccgggaagacgtggagatggagaatgtg
agagctgcgagacggatcttggcggagcgaataggggtttggtgcacggagaggcgtggt
ggccctccgctgcactgcctaacgcagctggaactggagaccgcaggtctgcgagcgctg
ccaccgcctcaggtgctgggtgcgctcccttgcttacgtgttctgaaccttggcggtaac
aaactgaggtgcctgtgtggtggattgctgcaatgtcgttgccttgaggaattgaacctc
gacgataactacctaacctctattcgaggggaacttaggaatctacactgtctgagggtg
ctttctgaaactgtcaatgaattgaagcgaatgcacaggatagaagtggttgatctccgc
aaaaaccaggtatgcaacgactcgaattacgcactcttaatgtggagaatgcttccaagt
ctctcacttcttgatggacgtggaaaattccaagactccgtttcatttacagcagttaac
ctacccagaaaacaggaggcgactaacataagaaagaagaaggcgatttctggaccgaaa
atatgtgagcggttccaccgaggccagctgcggaaggtttatctttcagaagttattcaa
acagcaaaacaagaaagtagtgaatatccaatttccggcaaagtgattttgggtacttgt
tcaaagttatga
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