Eucalyptus grandis (rose gum): 104423157
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Entry
104423157 CDS
T03547
Name
(RefSeq) periodic tryptophan protein 2
KO
K14558
periodic tryptophan protein 2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
104423157
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
egr03009
]
104423157
Ribosome biogenesis [BR:
egr03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
104423157
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GFIT
Motif
Pfam:
WD40
ANAPC4_WD40
Utp12
NBCH_WD40
WD40_like
WDR54
Utp21
Nup160
Motif
Other DBs
NCBI-GeneID:
104423157
NCBI-ProteinID:
XP_010033925
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All DBs
Position
10:37118972..37125309
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AA seq
890 aa
AA seq
DB search
MNYRFQNLLGAPYRGGNAVVTKNTRLISPVGNRIADTDLLKSQSATLPFQCSSDVSRLAV
SPDGAFLVVVDENRRALFVNLPRRAVLHRITFKHPVGALEFSPDGRLIAVGAGKLVQIWR
SPGFRKEFFPFELVRTFADCNDKVMSLKWSPDSSYLLVGSKDLTARLFCVRKLKGGYTKP
FLFLGHRDSVVGCFFGVEKGTDRVNRAYTIARDSYLFSWGYSGDVENTGGGEEPPAPGTP
ERSNERALEVNVKKRKELDDEEDGGVEDGECLLHRGKWELLRKDGFMQQQARVTSCDYHR
GLDLLVVGFSNGVFGLYQMPDFVCIHLLSISKEKITTAVFNELGNWLTFGCAKLGQLLVW
EWKSESYILKQQGHYFDVSCLAYSPDSQLLATGADDNKVKVWTVSSGFCFVTFSEHTNAI
TALHFMANNHCLLSASLDGTVRAWDLFRYRNFRTFTTPSSRQFVSLTADQSSEVICAGTL
DSFEIFVWSMKTGRLLDILSGHEGPVHGLMFSPTSAVLASSSWDKTVRLWDVFESKGAVE
TFPHTHDVLTVVYRPDGKQLACSTLDGQIHFWDPIDGLLMYTIEGRRDIAGGRLATDRRA
AANSSSGKYFTTLCYSADGSYILAGGSSKFICLYDVAEQVLLRRFQITHNLSLDGVLDFL
NSKKMTDAGPLDLIDDDDTDTEEGVDKQTRGKLGYDLPGSMPNRGRPIIRTKCLRIAPTG
RSFAAATTEGVLVYSTDETFIFDPTDLDIDVTPEAIDAALSEGLIKRALILSLRLNEDSL
IKKCVFAASPADIPALASSIPSRYLQRLIDAFAGLLENCPHLEFILRWCQEICKAHGQSI
QQNSRTLLPALKSLQKAITRMHQDLADTCASNEYMLRYLCSAGTRQKGSP
NT seq
2673 nt
NT seq
+upstream
nt +downstream
nt
atgaactaccggttccaaaacctcctcggcgccccctaccgcggcggcaacgccgtcgtg
accaagaacacccgcctcatctcccccgtcggcaaccgcatcgccgacacggacctcctc
aagtcccagagcgccaccctccccttccagtgctcctccgacgtctcccgcctcgccgtc
tcccccgacggcgccttcctcgtcgtcgtcgacgagaaccgccgcgccctcttcgtcaac
ctcccccgccgcgccgtcctgcaccggatcaccttcaagcaccccgttggcgccctcgag
ttctcccccgacggcaggctcatcgccgtcggcgccggtaagttggtccagatatggcgg
tccccggggtttaggaaggagttcttcccgtttgaattggttaggactttcgccgattgc
aatgataaggtgatgtcgttgaagtggagccccgattcgtcgtacttgctggttgggtcg
aaggatttgacggcgaggttgttttgcgtgaggaaattgaagggtggttatactaagccg
ttcttgtttttgggtcatagggattccgtcgtcggttgtttcttcggtgtggagaaaggg
acggacagggtcaatagggcttacacgatagctcgtgatagttatctattcagctggggt
tacagtggggatgtggaaaatacgggtggcggcgaggagccgcccgcaccagggactcca
gagaggagtaatgagagggctttggaagttaatgtgaagaaaaggaaggagcttgatgat
gaggaagatggtggcgtggaggatggtgagtgtttgttgcatagaggtaaatgggagttg
ctaaggaaagatggttttatgcaacaacaggccagagtgacatcttgtgattatcaccgt
ggacttgacctcctggttgtaggattctctaatggggtgtttggcttgtaccaaatgccc
gattttgtttgcatccacttgttgtcgatctcgaaggaaaagatcacgactgcagtgttc
aatgagcttggtaattggttgacatttgggtgtgcaaagcttgggcagttgcttgtgtgg
gagtggaaatcagagagttacatactgaagcaacaaggacattatttcgacgtgagctgc
cttgcatattcacctgattcgcaactcttggccactggagcagacgacaacaaagtgaag
gtctggacagtttcctctggcttctgctttgtgacattttcggagcacaccaatgcaatt
actgctctccattttatggctaataaccactgcctccttagtgcatcgcttgatgggact
gttcgtgcctgggatttattccgctatcgaaatttcaggacatttacgaccccttcttct
aggcagtttgtttctttgactgcagaccagagcagtgaagtaatttgtgcaggaaccctt
gattcatttgagatatttgtgtggtcgatgaagacaggccgcttgttggacattctaagt
ggtcacgaaggccctgttcatggtttgatgttctctcccaccagtgcggtcctagcttca
tcctcatgggacaagactgtcagattgtgggatgtttttgagtcaaaaggcgctgttgaa
acatttcctcacacacatgatgttcttacagttgtttatcgtccggatggaaagcagctg
gcttgtagtacattagatgggcagattcatttctgggatccaattgatggtttgttgatg
tacacaattgagggccgtagagacattgctgggggtcgacttgcaacagatcgtagagca
gctgctaactcaagttctggaaaatactttacaactctatgttattcggctgatgggagt
tacattctagctggaggaagtagcaaattcatttgtttgtatgatgttgctgaacaggtt
ttgctacgtaggtttcagataacccataatctgtctctcgatggagtacttgattttttg
aattcgaagaaaatgacagacgctggacctctagatttgattgatgatgatgataccgac
acagaagaaggagttgacaagcaaacccggggaaagttaggctatgacttaccaggatcc
atgcctaaccgtggacgccccattattcgaacaaaatgcctgaggattgccccaactggt
aggagttttgccgctgccacaactgagggggttctagtttactccactgacgagactttc
atctttgatccaactgatctagacatcgatgtgacaccagaggccattgatgcagctcta
agtgaaggtttaataaagcgggcgttgattctcagtcttcgtttgaatgaagattcactg
atcaagaaatgtgtttttgctgcaagtccggcggacattccagctcttgcttcatctatt
ccttctagatatttgcagaggctgatagatgcattcgctggtcttttagaaaattgccca
catctggagtttattcttcggtggtgccaggaaatctgcaaagctcatggtcagtctatc
caacaaaattcacggactctgcttcctgccttgaaatccctacaaaaggctatcacaaga
atgcatcaagacttggcagatacatgtgcctcaaatgaatatatgcttcgctatttgtgt
tctgcgggcaccagacagaaaggctcaccctga
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