Eucalyptus grandis (rose gum): 104434031
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Entry
104434031 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: vacuolar protein sorting-associated protein 41 homolog
KO
K20184
vacuolar protein sorting-associated protein 41
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09140 Cellular Processes
09141 Transport and catabolism
04148 Efferocytosis
104434031
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
egr04131
]
104434031
Membrane trafficking [BR:
egr04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
104434031
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
WD40
zf-RING_2
zf-RING_UBOX
Motif
Other DBs
NCBI-GeneID:
104434031
NCBI-ProteinID:
XP_039162614
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All DBs
Position
2:complement(56268358..56277555)
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AA seq
964 aa
AA seq
DB search
MQMAPIPSENGVEGDDEREDEEADEDEEEEEEEEAEEEDEDEEEPRLKYQRMGGSIPTLL
TNDAASCVAVAERMIALGTHGGTVHILDFLGNQVKEFAAHTAAVNDLSFDTEGEYIGSCS
DDGSVVINGLFTDERMKFDYHRPMKAIALDPDYAKKASRRFVAGGLAGHLYFNMKKWLGY
KDQVLHSGEGPIHAVKWRTSLIAWANDAGVKVYDSANDQRITFIERPRGSPRPELLLPHL
VWQDDTLLVIGWGTSVKIASIRSNPHKVANGTYNHIPASTTNQVDIVASFQTSYYISGIA
PFGDSLVVLAYIPGEEDGERDFSSNVPSRQGNAQRPEVRVVNWNNDELATDALPVHGFEH
YKAKDYSLAHAPFSGSSYAGGQWAAGDEPLYYIVSPKDVVIAKPRDAEDHISWLLQHGWH
EKALAAVEAGQGRSELIDEVGSRYLDHLIVERKYAEAASLCPKLLRGSASSWERXMGFHF
AHLRQLPVLVPYIPTDNPRLRDTAYEVALVALATNPSFHRELLSTVKSWPQAIYSSSPVI
QAIEPQLNTSSMTDALKEALAELYVIDGQYEQAFSLYADLMKPEVFDFIERYNLHEAIRE
KVVQLMMLDCKRAVPLLIQNRDLITPSEVLSQLLNASNKSNSRHFLHLYLHSLFEVNPHA
GREFHDMQVELYADFDPKMLLPFLRSSQHYTLEKAYNICVTKELIKEQVFILGRMGNSKK
ALAVIINNLGDIEEAVEFVSMQHDDELWEELIKQCLDKPEMVGVLLEHTVGNLDPLYIVN
MVPNGLEIPRLRDRLVKIITDYRTETSLRHGCNDILKADCVNLLVKYYKEARHAVCLSNE
EEEARAKKSDNKAYQEPEKSSSVRTTGVKSKTKGAARCCICFDPFSIRDVSVVVFFCCHS
YHTSCLMDSTYTISGKKGTKEASSDPTSHYDYEYEYDDGDEEDEDDDQKGTNRMRCILCT
TAAN
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgcaaatggcgccgataccgtcggagaacggcgtcgagggagacgacgagcgagaagac
gaggaagccgatgaggacgaggaggaagaggaagaagaggaagcggaggaggaggacgag
gacgaggaggagcctaggctcaagtaccagaggatgggaggcagcatccccacgctcctc
accaacgacgcggcgtcgtgcgtcgccgtcgccgagcgcatgatcgcgctcggcacccac
ggcgggaccgtccacatcctcgatttccttggcaatcaggttaaggaatttgctgcccat
acagccgctgtcaatgaccttagttttgacacggaaggtgaatatataggaagctgttca
gatgatggatctgttgtgataaatggcctcttcactgatgagagaatgaagtttgattat
caccgtccaatgaaggctattgctttagaccctgattatgccaaaaaagcatccagaaga
tttgtagctggtggtttggctggtcatttatattttaatatgaagaaatggttaggctac
aaggaccaggttttgcactctggcgaaggtccaattcatgcagtgaagtggagaaccagc
ttaattgcttgggccaatgatgctggcgtcaaagtttatgactcagccaatgatcagcgt
ataacatttattgagaggcctagaggaagcccgcgtcccgagcttttgctccctcatttg
gtttggcaggatgatacactgttggtcattggttggggaacatctgtgaaaattgcatcc
atcagaagtaatccgcataaagttgccaatggcacctataaccatattccagcctccact
acgaatcaggtggatattgtggcatcatttcagacaagctattacatatcggggattgct
ccctttggtgactctttggttgttctagcttatatcccgggggaagaagatggggagagg
gactttagtagcaatgtaccttcccgtcagggaaatgcacagagacctgaagtgcgtgta
gtaaattggaacaacgatgaactggctacagatgccctgcctgtacatggttttgagcat
tacaaggccaaggactactcccttgctcatgctcctttctcaggtagcagctatgctggg
ggccagtgggctgctggagatgagccattgtattatatcgtgtctcccaaagatgtggtt
atagcaaagcctagggatgctgaagatcatatctcatggcttctgcagcatggctggcat
gaaaaagctttagcagcagtggaagctggtcaaggacgcagtgaacttattgatgaggta
ggatccaggtaccttgatcatttgattgtggaaaggaagtatgctgaagctgcttctttg
tgtccaaaattgctgcgcggatctgcttcatcatgggagaggtaaatgggttttcatttt
gcacatctacgtcagcttcctgttttggttccatatataccaacagataatccaaggttg
cgtgatacagcatatgaggttgccctggtggctttggcaacaaatccgtctttccaccgt
gagctattatcaactgtcaaatcttggccgcaagcaatatattcatcatcacctgttata
caagccattgaaccacagctcaacacttcatccatgactgatgctctcaaggaggctctg
gcagagttgtatgtaattgatggccaatatgagcaagctttttcactctatgctgatctt
atgaagccagaagtgtttgacttcattgaaagatataacttacatgaagccattcgtgaa
aaggttgttcaattgatgatgctagattgcaaacgtgcagttcctttgttgatccaaaac
agggatttgataacaccatccgaagtgctttctcaacttttgaatgccagcaataagagc
aattcaagacattttttgcatctatatctgcattccttatttgaagtgaatcctcatgct
ggaagagagtttcatgatatgcaggtagagctctatgctgactttgatccaaagatgctg
cttccttttcttcgcagtagtcaacactatacacttgaaaaggcttataacatttgtgtt
acaaaagagcttattaaggagcaagtgtttatactgggaaggatggggaattcaaaaaaa
gctcttgctgtcatcatcaataatttgggagacatagaagaggctgtagagtttgtgagc
atgcagcatgacgatgagctatgggaagaattaattaagcaatgccttgacaaacctgaa
atggtgggtgtgttgctggagcacactgtggggaatctcgatccactttatattgtcaat
atggtgccaaatggtttggagatacctcggctaagggatcgccttgtcaaaatcatcact
gattacaggactgaaacatctctcagacatgggtgcaacgatattcttaaggcggactgt
gtcaacctcttggtaaagtactacaaagaagcaagacatgctgtgtgtttgagcaatgaa
gaagaagaggctcgagcaaagaaaagcgataataaggcttaccaggaaccagaaaaatcg
tcaagcgtgagaactacaggggtaaagtccaaaactaagggagctgcaagatgttgcatt
tgtttcgaccccttctccatccgagatgtgtctgtagtggttttcttttgctgtcattcg
taccacacaagttgtcttatggattccacatatacgattagtggaaaaaaggggactaag
gaagcttcctcagatcccacgtcgcattatgattatgagtacgagtatgacgacggtgat
gaggaagatgaggacgatgaccagaagggtaccaaccgcatgcggtgtatattatgtact
actgctgccaattga
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