Eucalyptus grandis (rose gum): 104443672
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Entry
104443672 CDS
T03547
Name
(RefSeq) DNA mismatch repair protein MSH4
KO
K08740
DNA mismatch repair protein MSH4
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egr03036
]
104443672
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Meiosis-specific proteins
Others
104443672
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
T2SSE
AAA_14
AAA_29
Motif
Other DBs
NCBI-GeneID:
104443672
NCBI-ProteinID:
XP_010055480
UniProt:
A0A059C171
LinkDB
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Position
5:complement(5750899..5761860)
Genome browser
AA seq
790 aa
AA seq
DB search
MEDEERSSMVIGLIENRAKEVGVAAFDLRSAALHLSQYIETSSSYQNTKTLMQFYDPVAI
IVSPNKLAPDGMVGVSELVDRFYPSVRKVVMARGCFDDTKGAMLVKNLAAKEPSALGPDS
YYKQYYLCLAAAAATIKWTEAEKGVIITNHSLPVTFNGSFDHMNIDATSVQNLEIIDPFH
SSLLGTSNKKRSLFHMLKTTKTIGGTRLLRANLLQPLKDIDTMNARLDCLDELMSNEQLF
FGLSQVLRKFPKETDRILCHFCFKLKKVTSGSLGFDNARKSQLLISSIILLKTALDALPL
LSTVLKEAKSSLLVNIHKSVCENQKYAAIRKRIGEVIDEEVLHARVPFVARTQQCFAVKT
GIDGLLDIARRSFCNTSEAIHNLATKYREEFKLPNLKLPFNNRQGFYFSIPQKDIQGKLP
SKFIQVVKHGNNIHCSTLELASLNVRNKSAAAECFIRTEICLEVLLDAIRENVSVLTLLA
EVLCLLDMIVNSFAHSISTKPVDRYSRPQFTENGPLAVDAGRHPILESIHNDFVPNSIFL
SEASNMVIVTGPNMSGKSTYLQQVCLIIILAQIGCYVPARFSTIKVVDRIFTRMGSMDNL
ESNSSTFMTEMKETAFIMQNLSPRSLIIMDELGRATSSSDGLAIAWSCCEFLLSVKAYTI
FATHMESLSELATIYPNVKVLHFHVDINCNRLDFKFQLKDGPRRVPHYGLLLAEVAGLPR
SVIDTARGIISRITQKELKRMEVNYEQYNALQVVYHVAQRLICLKYSSQDEDSIKQALQN
LKESYLQGRV
NT seq
2373 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggagagatcgagcatggtgatcggtctcatagagaacagagccaaggag
gttggagttgctgctttcgatctgagatctgccgcgctacatctctcgcagtatatcgag
actagtagttcataccaaaacacgaagactctgatgcagttttacgacccggtggcgatt
atcgtttcaccgaataagcttgcgcctgacggcatggttggagtttctgaacttgtagat
aggttttatccttcagtcaggaaggttgtgatggcacgcggatgcttcgatgacactaag
ggagctatgctggttaagaacttggcagcaaaggagccatcggcacttggtccggattca
tactataagcaatattatctctgcctggcggcagcagcagccactattaaatggactgaa
gcagagaaaggcgtgataataaccaaccactctctgccggtaacttttaatggatccttt
gatcacatgaacattgacgctactagtgtccaaaatttggaaattatcgatccattccat
tcttccctcttgggcacaagcaacaaaaagagaagcttgtttcatatgctaaagacaaca
aagactattggagggactagacttctccgggccaacctgctgcagccattgaaagatatt
gatactatgaatgctcgtctcgactgcttggatgaactgatgagcaatgagcagctgttt
tttggactctctcaggtcctgcgcaagttcccaaaagagaccgataggatactatgtcac
ttttgtttcaagctgaagaaggttacaagtggaagtctgggttttgataatgctagaaaa
agccaactgttgatatcaagcattattttgcttaaaactgctttggatgctttgccttta
ctctccacggttctaaaagaagccaaaagttctctcctggtgaacattcacaaatcggta
tgtgagaaccagaagtatgctgcaattagaaagaggataggggaagtgatcgatgaagaa
gtgcttcatgcaagggttccttttgttgcccgcacacagcagtgctttgctgtcaagact
ggaatagatggcttgctggatattgcaaggagatcattttgcaacacgagtgaagcaata
cataaccttgcaactaagtatcgtgaagaatttaaactgccaaatctaaaactccctttc
aacaatagacaaggcttttacttcagtattccacagaaggatattcaaggaaagcttcct
agcaagttcatacaggtcgtgaagcatgggaacaacattcattgctccacccttgaactt
gcttcgctgaatgtgcggaataagtctgctgcagctgaatgcttcatacgaacggaaata
tgcctggaagtgcttttagatgccatacgggagaatgtttctgtccttacactacttgca
gaagttttgtgccttttagatatgattgttaattcatttgcccatagcatatctactaaa
cctgttgatcggtactctaggccacaatttacagaaaatggtcccctggctgtagatgca
ggaagacaccctatcctggaaagcatacacaatgattttgttcctaacagtatcttcctt
tcagaggcatcaaatatggtgattgtcacgggtcctaacatgagtgggaagagtacttat
cttcagcaagtgtgcctgattataattcttgctcagattggttgctatgttcctgctcgt
ttctcaactataaaagtcgttgaccgtatattcacaagaatgggttcaatggataatttg
gaatcaaactctagtacgtttatgacagagatgaaggagactgcttttattatgcagaat
ctctctccaaggagtcttatcatcatggatgaacttgggagggcgacatcttcatctgat
ggattggccatcgcatggagctgctgtgagtttctcttatcagtaaaagcgtatacaata
tttgcgactcacatggagagcctgtcggaattagcaaccatctatccaaatgtgaaagtt
ctgcattttcatgttgacataaattgtaatcgcttagatttcaagtttcaactcaaggat
ggtccgcgacgtgtaccgcactatggccttctgttagcagaggtggcagggctaccaaga
tccgtaattgatacagccagaggcatcatatcaaggatcacacagaaggaactgaagaga
atggaagtgaactatgagcagtataatgctctccaggtggtgtaccatgtagctcagcgt
ttgatatgcctgaagtactccagtcaggatgaggattcaatcaagcaagcattgcaaaat
ctcaaggaaagttatctacagggaagagtatag
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