Eucalyptus grandis (rose gum): 104447428
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Entry
104447428 CDS
T03547
Name
(RefSeq) mRNA-decapping enzyme-like protein
KO
K12611
mRNA-decapping enzyme 1B [EC:3.-.-.-]
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104447428
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104447428
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104447428
mRNA degradation factors
5'-3' decay
Decapping complex
104447428
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DCP1
Motif
Other DBs
NCBI-GeneID:
104447428
NCBI-ProteinID:
XP_010059475
UniProt:
A0A059DJF1
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Position
1:complement(47623129..47628610)
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AA seq
368 aa
AA seq
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MSSQAGKLTPNLDQNSTKVLNLTVLQRVDPSIEEILITSTHVTLYEFNIDSNQWSRKDVE
GSLFVVKRNTQPRFQFIVLNRRSADNLVENLLGDFEYEVQVPYLLYRNAAQEVNGIWFYN
PRECEEVANLFTRILSAYSKVPSKPKPSTKSEFEELEGASSLSVMETLLEPSPTAPAIDS
PEDSTAFMNFFNMALNIGKHADPVKSMQHNHSAATVPLSPLVPTVASSPAPNPDMLNLSL
SSPYYPIPRNDSSDLSNGSDQFSRLIKPSSFLSTPSSSSALLLPPISSSNPTAASLRPPL
NLQHPHGTPLLNPFPPPTPSASLTPIPTPPADRPLINRERVRDALVMLVQDDQFVDMFYQ
TLLKVQFK
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtcgcaggccgggaaattgacgccgaatctggaccagaacagcaccaaggtgctc
aacctcaccgtcctccagcgcgtcgatcccagcatcgaggagatcctcatcacctccacc
cacgtcacgctctacgaattcaacatcgacagcaaccaatggagtcgcaaggatgtcgaa
ggatctctgtttgttgtcaagaggaatactcagccgcggtttcagttcatcgtgctgaat
aggcgaagcgcagataatttggtagagaatctgcttggagattttgagtatgaagtccag
gttccatacttgttgtatcgtaatgcagcgcaagaagttaatggcatttggttctacaat
ccacgcgaatgcgaggaggttgcaaatctctttactaggatactcagcgcgtattcaaag
gtgccctcaaagccaaagccttcaaccaaaagtgaatttgaggaacttgaaggagcttca
agcttgtctgtcatggaaacactgctagagccatccccaacagctcctgcaattgactct
cctgaagactcaacagcatttatgaacttcttcaatatggctttgaatattggaaagcat
gccgacccggtgaagtctatgcagcacaaccattctgctgcaactgtgcctttatctccc
cttgtacccactgttgcttcatctcctgcaccaaatcctgacatgctaaatctctctctt
tcgtctccctattatccaatacctcggaatgattcttctgatctttccaatggcagcgac
caatttagccgtctaatcaagccttcttcctttttatcaaccccatcgtcctcgtctgca
ctgttgctgcctccaatctcatcttcaaatcctactgctgcttcccttcgtcctcccctg
aatttgcaacacccacatggaactcctctgcttaatccattccctcctcccactccatcg
gcatctcttactcctattcctactcctccggctgacagacccttaatcaacagagagaga
gttcgtgatgcacttgttatgctcgttcaggatgatcagtttgttgacatgttctaccag
acattgctgaaggtacagttcaagtga
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