Eucalyptus grandis (rose gum): 104450011
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Entry
104450011 CDS
T03547
Name
(RefSeq) LOW QUALITY PROTEIN: transcription initiation factor TFIID subunit 12b
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
104450011
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egr03021
]
104450011
03036 Chromosome and associated proteins [BR:
egr03036
]
104450011
Transcription machinery [BR:
egr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
104450011
Coactivators
SAGA/TFTC/STAGA complex
104450011
Chromosome and associated proteins [BR:
egr03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
104450011
STAGA complex
104450011
TFTC complex
104450011
SAGA complex
104450011
SLIK complex
104450011
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Motif
Other DBs
NCBI-GeneID:
104450011
NCBI-ProteinID:
XP_010062697
LinkDB
All DBs
Position
6:43027803..43033023
Genome browser
AA seq
619 aa
AA seq
DB search
MADNPTSSPKPQSSNPMDQAASAASIPGIXSPNPQIPSQSPLSHSSPSIDPAQINSQISS
PPLPHYPQQQQQQQQQQQQQAQSQPQPQPQSLVHQQTQQSLVHQQQQQQQQQAQNVSAMN
NFQIQAGLPRTPSMSRLNQIQMGFMRQQQQQQQQQQQQGGVYGQVNFGGSQQNQPQNQQN
QMVTGNLPRSGLMGQSGHMPMLSGTAAAAAAHMNLQSQMLNSPRQKAGLISGSQFHSGNL
SGQSLQGLQAMGSMGSYNLSSPLRVNGAALSYGPTRMTTGQMRQQLSQSPQVQNLQRTSS
LFMNSPISGLTQGGQSAMMPNNLSQQQWLKQMPISGGPGSPSFRLQQRQQQALLQQQLAS
SPQFSQNPMAPNLQQLSQLVQQSSMGHPQPHQQQQQQQQQQQQLQQQQMHPQQQQQQQPS
PRMLGPAGQKSLSLTGSQPDATASGTTQGGSSSQGTEATNQLLGKRKIQDLVSQVDPQGV
LDPNVEDLLLEFADDFIDQVTTFACSLAKHRKSSTLESKDVLLHLEKNWGLTIPGFSSEG
QKHLKKPLASEFHKKRLDMVRALRDSTFTERSSDISKEITRQGSDNIIGPNHLIRPSPSS
DHLVTQATGSQMLQQLTRF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggcggacaacccgacctcgtcgccgaagccccagtcttcgaacccgatggatcaggcg
gcctcggcggcgtcaattcccggaatcncatcgccgaacccccaaatcccgtcccaatct
ccgctctctcactcctcgccttcaatcgaccccgcccagatcaattcccagatctcgtcc
cctcctctgcctcattacccccagcagcagcagcagcagcagcagcagcagcagcaacag
gcgcagtcgcagccacaaccgcagcctcaatcgctcgtccatcaacagacgcagcaatcg
ttggtgcaccagcagcagcagcagcagcagcagcaggctcagaatgtttccgccatgaac
aatttccaaattcaggcgggtcttccgagaacgccttcgatgtctaggttaaatcaaata
cagatgggttttatgaggcagcagcagcagcagcagcagcagcagcagcagcaaggtgga
gtgtatgggcaggtcaatttcggcgggtcccagcagaaccagccgcagaaccagcagaat
cagatggtgactgggaatctcccgcgatcgggtttgatggggcagagcggccatatgccg
atgctgtctggtacggccgccgcagctgctgctcacatgaatttgcagtctcagatgttg
aattcgccaaggcaaaaggcaggattaatatcagggagccaattccactctggtaattta
tctggacaatcgttgcaagggcttcaagcgatgggatcaatgggctcctataacttgagc
tcacccctaagggttaatggtgctgctctaagttatgggccaacgcggatgaccacaggg
cagatgaggcagcaattgtcacagtcccctcaagttcaaaacctgcaaaggacatcatcc
ctgttcatgaattccccgatatctggattgactcaaggtggacaatcagctatgatgccg
aacaatttgtcacaacagcagtggttgaagcaaatgccaatatctggtggtcctggttca
ccttcatttcgccttcaacagcggcagcaacaggctcttttgcagcagcaacttgcttca
tcccctcagttttcacaaaacccaatggccccgaatctgcaacagttatcccagctggtg
cagcagtcatcaatgggacatccacagccacatcagcagcagcagcagcagcagcagcag
cagcaacaactgcaacagcaacaaatgcatccgcagcagcagcagcagcagcagccttct
cctaggatgctgggacccgcaggccagaaatctcttagtttgactggatcacagccagat
gctacggcttccggtacaacacagggagggagttcaagtcaaggaactgaggcaactaat
caacttcttgggaaaaggaagatacaggacttggtttcacaggtggatccacagggagta
ttggatcctaatgttgaggatcttcttttagaatttgctgatgactttattgatcaagta
actacttttgcctgcagtttggctaaacatcgcaaatcatcgacgttggagtccaaagat
gtattactgcacctagaaaaaaattggggtttgacaattcctggattttcaagtgaaggg
cagaagcacctaaagaaacctttagctagtgagtttcacaaaaagcgtcttgatatggtt
cgtgcattgagggattctacattcacggaaagaagttcagatatatctaaagaaataacg
agacaggggtctgacaacatcattgggcccaaccacttaataaggccttcaccaagttct
gatcatttggtcacacaagcaactggttctcagatgctgcagcaactaacgcgtttttaa
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