Eucalyptus grandis (rose gum): 104450015
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Entry
104450015 CDS
T03547
Name
(RefSeq) serine/arginine-rich splicing factor SR45 isoform X2
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03013
Nucleocytoplasmic transport
egr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
104450015
03015 mRNA surveillance pathway
104450015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
egr03019
]
104450015
Messenger RNA biogenesis [BR:
egr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
104450015
BRITE hierarchy
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_3
RRM_occluded
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
104450015
NCBI-ProteinID:
XP_010062702
UniProt:
A0A059BV43
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Position
6:complement(43097367..43102837)
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AA seq
410 aa
AA seq
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MAKPGRGRPSRSGSPSGSSSRSRSYSGSDSRSSSRSRSPSKSPSRSRSRSVTSSSSLSRS
SRSRSPPRHRRSSPEVVKRGRSPPPPPPPKRASPPPRKVSPVRESLVLHIDSLSRNVHEG
HLKEIFSNFGEVVHVELAMDRTVNLPKGYGYVEFKTRADAEKAQLYMDGAQIDGNFVRAK
FTLPPRQKVSPPPKSAPTALKKDASKSDNVGADAEKDGYKQPRDSPPHRKALSPPLRRSP
GPRRGGSPRRMLDSSPRRRGESPIRRRGVSPYRRGETPPRRRPASPGRVRSPLSPPRRHR
SPPRARASPIRRRSPLSIRRRSPPRRARSPPRRSPISRRRSRSPVRRVARSPSPRRGRAP
QARRGRSSSYSDSPSPRKIPRRITSRSPRRPIRGRSSSDTSSSSSPSRKP
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaacccggcagaggccgcccttcgcggtcgggctcgccgtccggttcctcctcc
cgatcccgctcctactcgggctccgactctcgctccagctccaggtcccgttccccgtcc
aagtccccctcccgctctcgctccagatcggtcacctcctcctcctccctttcgcgcagc
tcccgcagccgcagcccccctcgccaccgccgaagttctcctgaggtagtcaagcgaggc
cgttcccctccgccgccgccgccacctaagagagcttctccgccccccaggaaagtttct
cctgttcgagaatctcttgttcttcacatagactcgctcagcagaaatgttcatgaaggc
cacctgaaggagatattcagtaactttggtgaagtcgtgcatgtggagcttgccatggac
cggactgtgaatcttccaaaaggatacggttacgtcgagttcaaaacaagagctgatgct
gaaaaggctcagctgtatatggatggagctcaaattgatggaaattttgttcgggccaag
tttacattaccgcctagacagaaggtttcgccaccaccaaaatctgctccaacagctttg
aagaaagatgcttcaaaatctgataatgttggtgctgatgcagaaaaagatggatataaa
cagccaagagactctcctcctcatcggaaagctctttccccaccactgcgaaggtctcct
ggacctcgtagaggtggatctccaagaagaatgctagattcttccccacgtcgacgagga
gagtcgcccatccgccgtcgaggagtctccccctatcgacgtggtgagacacctccaaga
aggcggcctgcatccccgggtagagttcgttcccctttgtctcctccaaggcggcatagg
tcccctccaagagctcgggctagtccaatccgaagacgttcgcccctttctattaggcgc
cgttcaccacctagacgagctagaagtccacctagaaggtctccaatcagtcgacggcgt
agtcgctctccggtgcgcagggttgctcgatcaccttctcctaggagaggtcgagcacca
caagcaaggcgtggcaggtcatcgtcgtactctgactcaccaagtccacgcaagataccg
cggcggataacgagtcgcagccctagaaggcccataaggggaagaagctccagcgataca
agcagcagcagctcgccatctcgtaagccatag
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