Elaeis guineensis (African oil palm): 105046359
Help
Entry
105046359 CDS
T03921
Name
(RefSeq) transcription initiation factor TFIID subunit 12b isoform X1
KO
K03126
transcription initiation factor TFIID subunit 12
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
105046359
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
egu03021
]
105046359
03036 Chromosome and associated proteins [BR:
egu03036
]
105046359
Transcription machinery [BR:
egu03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
105046359
Coactivators
SAGA/TFTC/STAGA complex
105046359
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
105046359
STAGA complex
105046359
TFTC complex
105046359
SAGA complex
105046359
SLIK complex
105046359
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIID_20kDa
CBFD_NFYB_HMF
Histone
Motif
Other DBs
NCBI-GeneID:
105046359
NCBI-ProteinID:
XP_010923229
UniProt:
A0A6I9RAS8
LinkDB
All DBs
Position
5:complement(49313732..49326729)
Genome browser
AA seq
638 aa
AA seq
DB search
MAENSTSSSPQKPLGTPSGGGGDPIPTPNTQNPNLPSPQITPSPSINELSQISSPHIPQH
QTQINPAAAAAAAAALDYASKQSLQPQSQQQQQLQAQQQQLPSQQQSLMPGSTTFQLQQN
LLRSGPMPRISQLQQQYGAAAAASAMRQHTGMYGGQVNFGAAQIQQQQQQPQQQQMAAAG
LSRAGTLGQAGQLPMLPGQTAAHLNLQSQMLAQLQPRQKMGLVQGTQFHPGNSSGQALQG
MQTMGVMNSLGLNPQLRANGPLSYAQQRFAHGQMRQQQLSQQTGLTSPQKLPGQSLPRTT
SVAAMNPQLPGLTQNGQSALMQTTLSQQQQWLKQMQPSMGASVSPSYHLQQQQRQQQAFL
PQQLSSSQLHQKAMGLTQQQISQLAQQQSQLGTQQQQQLLQQQQQLLQQQQQQQLQQQQL
QQQQQQLQQQQQQQLQQQSPRMPGPALQKSLSMTGSQPETPASATTMTGGSSSQGMEATN
QLLGKRRIQDLASQVDPQCKLDPEVEELLLEMADDFINSVTTFACSLAKHRKSSTLEAKD
VLLHLEKNWNLTIPGYSKEEQNQQGKSVPVDVHKKRLETVRSLMESQLSERDVSVAKGTT
KQVTSDSASDHPIKASPSSEQLSNSAIGSQMLHKVHQF
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
atggccgagaactccacctcctcctcccctcagaagcccctcggcaccccgagcggtggc
ggtggagaccccatccccaccccaaacacccaaaaccctaatctcccctccccccagatc
accccatccccttccatcaacgagctatcgcagatctcctccccccacatcccccaacac
cagacccaaatcaaccccgccgccgccgccgccgccgccgccgccctggattatgcttcc
aagcaatccctgcagccccaatcccaacagcagcagcagctccaagcccagcaacaacag
cttccgagccagcagcagagcctgatgccaggttccacgaccttccagctccagcagaac
ctcctgagatcggggccgatgccgaggataagccagcttcagcagcagtacggcgcggcg
gcagcggccagcgcgatgcggcagcacaccgggatgtatggcgggcaggtgaactttggc
gcggcgcagattcagcagcaacagcaacaaccgcagcagcagcagatggctgctgccgga
ctgtcgagggccgggacattggggcaggccggccagctgccaatgctgcccgggcagacc
gctgcccatctgaatctgcagtcccagatgctcgcgcagttgcagccaaggcagaagatg
ggtttggtccaaggtacacagtttcatcctggtaattcatcaggacaggcattgcaaggg
atgcaaacaatgggggtgatgaattcgcttggtttgaatccgcagctaagagctaatggg
cctctttcttatgctcagcaacgttttgcccatgggcaaatgaggcagcagcagctgtcg
caacaaacgggtctcacatctcctcagaagctacctggtcaaagcttaccgaggacgaca
tcagtagcagcaatgaaccctcagctacctggtttaactcaaaatgggcaatcagcattg
atgcagactaccctctctcagcagcagcaatggctgaagcaaatgcagccatcaatgggt
gcatcagtttctccttcttatcaccttcaacaacagcagaggcagcaacaggccttcttg
ccacaacaactgtcttcatctcagctgcatcaaaaagccatgggcttgactcaacagcag
atctctcaactggcacaacagcagtctcaactgggcactcagcagcagcagcaattgctg
cagcagcagcagcaattgctgcagcagcaacagcaacaacagctgcaacagcagcagctg
cagcagcagcagcagcagctgcagcagcagcagcagcagcagctgcagcagcaatctcca
aggatgccagggcccgcactccaaaagtcattaagtatgactggatcacaaccagaaaca
cctgcatctgccacaactatgactggtggtagttcaagtcaagggatggaagcaactaat
caacttcttggaaagagaaggatccaggatttagcttcacaggtggatccccaatgtaag
ctggatcctgaagttgaagaactccttttggagatggctgatgacttcattaattcagtt
accacatttgcatgcagtcttgcaaagcatcgtaagtcttcaacattagaggccaaggat
gtattgctacacctagagaaaaactggaacttgaccattcctggttattcaaaggaggag
cagaatcagcaaggaaaatctgtacctgtcgatgttcacaagaaacgtctggaaacggtc
cggtcattgatggagtcccagctgtcagaaagagatgtaagtgttgccaaaggaacaaca
aaacaggttacaagcgattcagctagtgatcatccaataaaagcttcaccaagttcagag
cagttatccaattcggcaattggctcgcagatgctgcacaaagtacaccagttttag
DBGET
integrated database retrieval system
