Elaeis guineensis (African oil palm): 105058918
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Entry
105058918 CDS
T03921
Name
(RefSeq) histone deacetylase 9
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
egu
Elaeis guineensis (African oil palm)
Pathway
egu03082
ATP-dependent chromatin remodeling
egu03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
egu00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
105058918
03083 Polycomb repressive complex
105058918
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
egu03036
]
105058918
Enzymes [BR:
egu01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
105058918
Chromosome and associated proteins [BR:
egu03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
105058918
HDAC complexes
Sin3A-HDAC complex
105058918
BRAF-HDAC complex
105058918
REST complex
105058918
SHIP complex
105058918
MiDAC complex
105058918
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
105058918
Heterochromatin formation proteins
Other heterochromatin formation proteins
105058918
Chromatin remodeling factors
NuRD complex
105058918
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Motif
Other DBs
NCBI-GeneID:
105058918
NCBI-ProteinID:
XP_010940301
UniProt:
A0A6I9SB64
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Position
1:complement(49210730..49217855)
Genome browser
AA seq
431 aa
AA seq
DB search
MPSKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFADELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKFHARVLYIDIDIHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDIKEIGEREGKYYAINVPLKDGIDDASFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIEGHSECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDAELPNEIPDNEYAKYFAPDYTLKIQNGNMENLNSKSYLSTIK
VQVLESLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVGQHTQDKQIQRDDEYYDGD
NDNDHNMEDGL
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaaagacagaatagcgtatttctacgacggagatgtgggtaatgtttatttt
ggaccaaatcatccgatgaaaccgcatcgactctgtatgacgcaccatcttgtgctctca
tacgagcttcacaagaagatggagatatatcggccgcataaggcatatccagtggagctt
gcacagttccattcagcagattatgtggaatttttgcatcggattactcctgacacacaa
catttgtttgcggacgaattagctagatataatctaggagaagattgccctgtgtttgag
aatttgtttgagttttgtcaaatttatgctggtggcacaatagatgctgcacgaaggctg
aaccatcagctttgtgacattgctataaattgggctggtggtttgcaccatgccaaaaaa
tgcggggcatctggattttgctatattaatgacttagtgttgggaattctagagcttctt
aaatttcatgctcgagttttatatattgatatagatattcaccatggtgatggagttgaa
gaagctttctatttcacagatagggtgatgactgtaagtttccacaagtatggggatatg
ttctttcctggaacaggtgacatcaaggaaataggtgaaagggagggaaaatattatgcc
atcaatgtcccactcaaggatggaatcgatgatgctagtttcactcgacttttcaaaaca
attattgccaaggttgttgaaacatatctaccaggtgtgatcgttcttcaatgtggagct
gattcattggctggagatcgcttgggttgcttcaatctctccattgaagggcactctgaa
tgtgtcagatttgtgaagaaattcaatttgcctctattggtaactggtggtgggggttac
acaaaagaaaatgtagctcgctgctggactgttgaaactggggtccttttagatgctgaa
cttccaaatgaaattccagataatgagtatgccaaatattttgccccagattacactctg
aagattcagaatggcaatatggagaacttgaatagcaagtcatatcttagcacaataaaa
gtgcaagttctggaaagtttgcggtgcatacaacatgctcccggtgttcagatgcaagag
gttcctccagatttttatattccagattttgatgaagatgagcagaatccagatgaaagg
gttggccagcatacccaagataagcaaattcagcgggatgatgagtactatgatggggac
aatgacaatgatcataacatggaggatggtctgtaa
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