KEGG   Elaeis guineensis (African oil palm): 105058918
Entry
105058918         CDS       T03921                                 
Name
(RefSeq) histone deacetylase 9
  KO
K06067  histone deacetylase 1/2 [EC:3.5.1.98]
Organism
egu  Elaeis guineensis (African oil palm)
Pathway
egu03082  ATP-dependent chromatin remodeling
egu03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:egu00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    105058918
   03083 Polycomb repressive complex
    105058918
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:egu03036]
    105058918
Enzymes [BR:egu01000]
 3. Hydrolases
  3.5  Acting on carbon-nitrogen bonds, other than peptide bonds
   3.5.1  In linear amides
    3.5.1.98  histone deacetylase
     105058918
Chromosome and associated proteins [BR:egu03036]
 Eukaryotic type
  Histone modification proteins
   HDACs (histone deacetylases)
    Class I HDACs
     105058918
   HDAC complexes
    Sin3A-HDAC complex
     105058918
    BRAF-HDAC complex
     105058918
    REST complex
     105058918
    SHIP complex
     105058918
    MiDAC complex
     105058918
   Polycomb repressive complex (PRC) and associated proteins
    Noncanonical PRC1 (PRC1.6)
     105058918
  Heterochromatin formation proteins
   Other heterochromatin formation proteins
    105058918
  Chromatin remodeling factors
   NuRD complex
    105058918
SSDB
Motif
Pfam: Hist_deacetyl
Other DBs
NCBI-GeneID: 105058918
NCBI-ProteinID: XP_010940301
UniProt: A0A6I9SB64
LinkDB
Position
1:complement(49210730..49217855)
AA seq 431 aa
MPSKDRIAYFYDGDVGNVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVEL
AQFHSADYVEFLHRITPDTQHLFADELARYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NHQLCDIAINWAGGLHHAKKCGASGFCYINDLVLGILELLKFHARVLYIDIDIHHGDGVE
EAFYFTDRVMTVSFHKYGDMFFPGTGDIKEIGEREGKYYAINVPLKDGIDDASFTRLFKT
IIAKVVETYLPGVIVLQCGADSLAGDRLGCFNLSIEGHSECVRFVKKFNLPLLVTGGGGY
TKENVARCWTVETGVLLDAELPNEIPDNEYAKYFAPDYTLKIQNGNMENLNSKSYLSTIK
VQVLESLRCIQHAPGVQMQEVPPDFYIPDFDEDEQNPDERVGQHTQDKQIQRDDEYYDGD
NDNDHNMEDGL
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgccgtccaaagacagaatagcgtatttctacgacggagatgtgggtaatgtttatttt
ggaccaaatcatccgatgaaaccgcatcgactctgtatgacgcaccatcttgtgctctca
tacgagcttcacaagaagatggagatatatcggccgcataaggcatatccagtggagctt
gcacagttccattcagcagattatgtggaatttttgcatcggattactcctgacacacaa
catttgtttgcggacgaattagctagatataatctaggagaagattgccctgtgtttgag
aatttgtttgagttttgtcaaatttatgctggtggcacaatagatgctgcacgaaggctg
aaccatcagctttgtgacattgctataaattgggctggtggtttgcaccatgccaaaaaa
tgcggggcatctggattttgctatattaatgacttagtgttgggaattctagagcttctt
aaatttcatgctcgagttttatatattgatatagatattcaccatggtgatggagttgaa
gaagctttctatttcacagatagggtgatgactgtaagtttccacaagtatggggatatg
ttctttcctggaacaggtgacatcaaggaaataggtgaaagggagggaaaatattatgcc
atcaatgtcccactcaaggatggaatcgatgatgctagtttcactcgacttttcaaaaca
attattgccaaggttgttgaaacatatctaccaggtgtgatcgttcttcaatgtggagct
gattcattggctggagatcgcttgggttgcttcaatctctccattgaagggcactctgaa
tgtgtcagatttgtgaagaaattcaatttgcctctattggtaactggtggtgggggttac
acaaaagaaaatgtagctcgctgctggactgttgaaactggggtccttttagatgctgaa
cttccaaatgaaattccagataatgagtatgccaaatattttgccccagattacactctg
aagattcagaatggcaatatggagaacttgaatagcaagtcatatcttagcacaataaaa
gtgcaagttctggaaagtttgcggtgcatacaacatgctcccggtgttcagatgcaagag
gttcctccagatttttatattccagattttgatgaagatgagcagaatccagatgaaagg
gttggccagcatacccaagataagcaaattcagcgggatgatgagtactatgatggggac
aatgacaatgatcataacatggaggatggtctgtaa

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