Edwardsiella hoshinae: A9798_01855
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Entry
A9798_01855 CDS
T04508
Name
(GenBank) selenocysteinyl-tRNA-specific translation elongation factor SelB
KO
K03833
selenocysteine-specific elongation factor
Organism
eho
Edwardsiella hoshinae
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
eho03012
]
A9798_01855
Translation factors [BR:
eho03012
]
Eukaryotic type
Elongation factors
A9798_01855
Prokaryotic type
A9798_01855
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
bact_SelB_WH_2nd
SelB-wing_3
SelB-wing_2
SelB-wing_1_3
GTP_EFTU_D2
MMR_HSR1
GTP_EFTU_D4
SRPRB
ABC_ATPase
Motif
Other DBs
NCBI-ProteinID:
AOV95815
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Position
complement(417073..418950)
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AA seq
625 aa
AA seq
DB search
MIIATAGHVDHGKTTLLRALTGVDTDRLPEEKRRGMTIDLGYAYLPLADGRVVGFIDVPG
HEKFLANMLAGIGGIPHALLVVACDDGVMAQTREHLLLLRLAGRPALTVALTKATRADEA
QRARVRAQVQTLLAEQGWPDAPLFETDALSGQGIDALRQHLLSQSAAPARVDRRFRLAID
RAFSVKGSGLVVTGTALAGRVRVGDTLWLTGCDKPVRVRTLHAQNRDASEAEAGQRVALN
LSGDVEKAQIQRGDWLLAQRPAVPPAQRVLVALDGVAPLQHWQPLHLHHAARHITGRLSL
LETHSTAQGEALAELILDHPLWLAEGDTLILRDIAARHTLGAARVLQLTVPRRGKRQPVF
LDTLRRLAQADDDATVLALRLPDATLSVAELGWARQLSDSACQALLARDDLLLVGDHLLS
RTTAEQLRQRLLETLADYHQQHGDQLGVGRARLRRMALPTEPEGLVFHLLGELLAEGALC
NSRGWLHLPQHNIAMTPQQLALWQRAAPLFADEPWWVRDLATTLGVEEETMRRTLRQAAL
LGHITAVVRDRYYRTERLYHFAALIRQLDASQGSTSAADFRDQLGIGRKLAVQILEFFDR
SGFTRRRANDHLLRDRALFCSDEVN
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgatcatcgctactgccggacacgtcgatcacggcaaaaccaccctactgcgcgccctg
accggggttgataccgaccgcctgccggaagagaagcggcgtggcatgaccatcgatctc
ggctacgcctatctccccttggcggatggacgggtagtcggctttatcgatgtgcccgga
cacgagaagtttctcgccaacatgctggccgggatcggcggcatcccgcatgccctgctg
gtggtcgcctgcgatgatggggtgatggcgcagacgcgcgaacatctgttgctgctgcgt
ctggcggggcgtccggcactgaccgtggcgctgaccaaggcgacgcgggcggatgaggcg
cagcgagcacgcgtacgcgcccaggtgcagaccctgctggccgagcagggctggcccgac
gcaccgctgttcgaaaccgatgccctcagcggccagggcatcgatgccctacgtcaacat
ctgcttagccagagtgcggccccggcccgggtcgatcgccgcttccgcttagccatcgac
cgcgccttcagcgtcaagggcagcgggctggtggtgaccggtaccgccttggcaggccgg
gtgcgtgtcggcgataccttatggctaaccggttgcgataagccggtgcgggtacgcacc
ctgcatgcgcaaaaccgcgacgcgagcgaggccgaggcaggccaacgcgtggcactgaac
ctcagcggcgacgtcgagaaggcgcagatccaacgcggcgactggctcttagctcaacgt
cccgccgttccaccggcgcaacgggttctggtggcgctggatggcgtcgccccgttgcaa
cactggcagccgctgcatctgcatcatgccgcccgccatattaccgggcgtctctcgctg
ctggagacccactccaccgcccagggggaagcactggccgagctgatcctcgatcacccc
ctctggctggcggagggcgacaccctgatcctgcgcgacatcgcggcgcgccataccctg
ggcgcggcgcgggtgttacaactcaccgtcccgcgccgaggcaaacgccaacccgtgttc
ctcgacacgctacgccgcctggcgcaagcggatgacgacgccacggttctggcgctacgc
ttgcccgacgcgacgctgagtgtcgccgagctggggtgggcgcgtcaactgagcgacagc
gcctgtcaggcgctgctggcgcgcgacgatctgctgttggtcggcgatcatctgctcagc
cggacgacggcagagcagctgcgccaacgcctactggagacgttggcagactaccatcaa
cagcacggcgatcagctcggtgtcgggcgcgctcgcctgcgacgcatggcgctgccgacc
gagccggaaggcctggtgttccatctcctcggcgagttgctggccgaaggggcgctgtgc
aacagccgaggatggttacatctgccgcagcacaacatcgccatgacgccgcagcaactc
gccctgtggcaacgcgccgcgccgttgtttgccgacgagccgtggtgggtgcgcgatctg
gcgaccacgctcggcgtcgaggaggagacgatgcgccgcacgctacgtcaggcggcgctg
ctcggccacatcaccgccgtggtgcgtgaccgttactaccgtaccgaacgcctgtaccac
ttcgcggcactgatccgccagttggatgccagccagggcagcaccagcgcggccgacttc
cgtgatcagctcggcattggccgaaagctggcggtgcagatcctcgagttcttcgatcgc
agcgggtttacccggcgacgcgccaacgaccatctgttgcgcgatcgcgcgctcttctgt
agcgatgaagtcaattaa
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