Eurypyga helias (sunbittern): 104503809
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Entry
104503809 CDS
T08356
Symbol
CNOT6
Name
(RefSeq) CCR4-NOT transcription complex subunit 6
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
ehs
Eurypyga helias (sunbittern)
Pathway
ehs03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ehs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
104503809 (CNOT6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ehs03019
]
104503809 (CNOT6)
Enzymes [BR:
ehs01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
104503809 (CNOT6)
Messenger RNA biogenesis [BR:
ehs03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
104503809 (CNOT6)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
104503809 (CNOT6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_8
LRR_4
LRR_1
LRR_6
Motif
Other DBs
NCBI-GeneID:
104503809
NCBI-ProteinID:
XP_010145119
LinkDB
All DBs
Position
Unknown
AA seq
544 aa
AA seq
DB search
MYTIMSSEEAANGKKSHWAELEISGKVRSLSSSLWTLTHLTALHLSDNSLSRIPSDIAKL
HNLVYLDLSSNKIRSLPAELGNMVSLRELHLNNNLLRVLPFELGKLFQLQTLGLKGNPLT
QDILNLYQEPDGTRRLLNYLLDNLAGTAKRISTEQPPPRSWIMLQEPDRTRPTALFSVMC
YNVLCDKYATRQLYGYCPSWALNWEYRKKAIMQEILSCNADIISLQEVETEQYYSFFLVE
LKERGYNGFFSPKSRARTMSEQERKHVDGCAIFFKTEKFTLVQKHTVEFNQLAMANSEGS
EAMLNRVMTKDNIGVAVLLELRKELIEMSSGKPHLGMEKQLVLVANAHMHWDPDYSDVKL
VQTMMFLSEVKNIIDKASRSLKPGVSGELGTIPLVLCADLNSLPDSGVVEYLSTGGVETN
HKDFKELRYNESLTNFSCNGKNGTTNGRITHGFKLKSAYENGLMPYTNYTFDFKGIIDYI
FYSKPQLNILGILGPLDHHWLIENNISGCPHPLIPSDHFSLFAQLELLLPFLPPVNGIHL
PGRR
NT seq
1635 nt
NT seq
+upstream
nt +downstream
nt
atgtacacaattatgtcctcagaggaagcagccaacgggaagaaatcacactgggcagag
ttggaaataagtgggaaagtgagaagcttgagttcgtcattgtggacactgacccatttg
acagctttgcatctcagtgacaattccttatcccgtattccttcagacattgccaagctt
cacaatctggtatatttggacctgtcctctaataaaattcgcagtttaccagcagagctc
ggaaacatggtgtcactcagggaactacatttaaataacaacctgttacgagttttacct
tttgagctgggaaaactgttccagttacagactttgggtctgaaaggaaatccgcttaca
caggatattctgaacctttatcaggaaccagatgggacacgacggctactgaactatttg
cttgataatttggcaggtactgcaaaaagaatttcaacagaacaaccacctccaagatct
tggattatgttgcaagaaccagaccgtacaagaccgacagccttgttttctgtcatgtgt
tacaacgtactctgcgataaatacgctacccggcagttgtatggctattgtccatcttgg
gcattgaactgggaatacagaaaaaaagccattatgcaggaaatcctgagctgcaatgct
gacatcataagtcttcaggaggttgaaaccgaacagtactacagctttttcctggtagaa
ctgaaagaacgtggctacaatggattcttcagtccaaaatctagagctaggacaatgtca
gaacaggaaagaaaacacgttgatggttgtgcaatatttttcaaaacagaaaagttcact
ttggttcagaaacatactgttgagttcaatcaactggctatggcaaactcagaaggttcg
gaagcgatgctgaacagagttatgacaaaagataacatcggagtggctgtgttgttagaa
ctgcgaaaggagttgatagaaatgtcgtctggaaagccacatcttgggatggaaaagcag
ctagttcttgtagctaatgcacatatgcattgggacccagattattctgatgtgaagctg
gttcagactatgatgttcctgtccgaggtaaagaacattattgataaagcttctcgtagt
ctcaaacctggtgtttcgggagaacttggaaccattccacttgtactgtgtgcagatctc
aattctctaccagactctggtgttgttgagtacttgagcactggtggagtggaaacaaac
cacaaagattttaaggaactgagatacaatgaaagtcttactaacttcagctgtaatgga
aaaaatggaacaacaaatggaagaattacacatggtttcaagttgaagagtgcctatgag
aatggtctcatgccttacacaaattacacatttgacttcaagggtattattgactacatc
ttctactctaaacctcagctaaacatacttggcattcttggacctttggatcatcattgg
ttaatagagaacaatataagtggttgtccacatccactcatcccttctgaccacttctca
ctttttgcacaactggagcttttgctgcctttcctgcctcctgtaaatggaatccatctc
ccgggcaggaggtag
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