Emiliania huxleyi: EMIHUDRAFT_450596
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Entry
EMIHUDRAFT_450596 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K12856
pre-mRNA-processing factor 8
Organism
ehx
Emiliania huxleyi
Pathway
ehx03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
EMIHUDRAFT_450596
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ehx03041
]
EMIHUDRAFT_450596
Spliceosome [BR:
ehx03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
EMIHUDRAFT_450596
Complex C
U5 SnRNP specific factors
EMIHUDRAFT_450596
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
U5_2-snRNA_bdg
PROCT
PRO8NT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
17270262
NCBI-ProteinID:
XP_005777144
JGI:
Emihu1_450596
UniProt:
R1EDC7
LinkDB
All DBs
Position
Unknown
AA seq
2055 aa
AA seq
DB search
MSGLPPGYPYGAAGQPPGYGGPPPPFPGMAPPGMQPPPGYGGPPPPFPGMAPPGMQPPPG
MMPPPGMMPPPGMMPPPGMMPPPGMHPGAPMAPPPSGAGDADMEDADGAPSAEMLERARK
WQSLNARRYGERRKHGHIDAPKEDMPPEHVRKIVKDHGDMTNKKFRHDKRVYLGALKYVP
HAVLKLLENMPMPWEQIRTVPILYHITGAITFVNDIPKGYNMLNLLIHRKNVNYLHLDYN
FNLKPVKTLTTKERKKSRFGNAFHLCREILRLTKLVVDAHVQYRLGNVDAYQLADGLQYI
FAHVGQLTGMYRYKYRLMRQIRMCKDLKHLIYYRFNTGPVGKGPGCGIWAPGWRVWLFFL
RGVVPLLERWLGNLLARQFEGRSSKGIAKTVTKQRVESHYDLELRAAVMHDILDMMPEGV
KTNKSRTILQHLSEAWRCWKANIPWKVPGMPAPIENMILRYVKSKADWWTNVAHYNRERI
RRGATVDKTVTKKNLGRLTRLWLKAEQERQHNYLKDGPYVSAEEAVAIYTTMVHWLESRK
FSPIPFPPLSYKHDTKLLILALERLKESYSAASRLNQTQREELGLIEQAYDNPHEARAAL
SRIKRHLLTQRAFKEVTMEFMDLYSHLVPVYEIEPLEKITDAYLDQYLWYESDKRHLLPN
WVKPADTEPAPLLVYKWCLGVNNLADVWDTSNGECVVCVETQYTKMYEKVLDHNIADYMT
AKNNVNLTFKDMNHTNSYGILRGLQFASFIMQFYGLMLDLLVLGLTRASELAGPPAVPND
FLQFRDTATETRHPIRLYCRYIDRLHILLRLTADECKDLIQRYLTEHPDPNNENMVGYNN
RKCWPRDSRMRLMKHDVNLGRAVFWDMKNRLPRSVTTIDWEESFVSVYSKDNPNLLFNMS
GFEVRILPKMRMLNDEFVSKDGVWSLQNETTKERTAQAFLRVDNQSMRYFENRVRQVLMS
SGSTTFTKIVNKWNTALIGLMTYFREAAHIPTRGLGRHAPRDAPAAPSDRRRLNSKMPSR
FPPVVFYTPKEIGGLGMLSMGHVLIPQSDLRFSKQTDAGITHFRSGMSHEEDQLIPNLFR
YIQPWESEFVDSQRVWAEYALKRQEANAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTL
AYDKGWRVRTQFKEFQIMRQNPFWWTHQRHDGKLWNLNNYRTDMIQSLGGVEGILEHTLF
KGTYFPTWEGLFWEKASGFEESMKYKKLTNAQREGMASPHDHTHNLIQIPNRRFTLWWSP
TINRANVYVGFQVQLDLTGIFMHGKIPTLKISLIQIFRAHLWQKIHESVVMDLCQVFDQE
LDALEIETVQKETIHPRKSYKMNSSCADVLLFAAYKWQVSKPALLAEPKDVYDGSTATKY
WLDVQLRWGDYDSHDVERYTRAKFLDYTTDNMSIYPAPTGIMIGLDLAYNLHSAYGNFIP
GMKPLVTQALAKIMKSNPALYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFV
DDTNVYRVTIHKTFEGNLTTKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWK
TAEEVAALIRSLPVEEQPKQIIVTRKGMLDPLEVHLLDFPNIMIKGSELQLPFQSCLKVE
KFGDLILKATEPQMVLFNIYDDWLKTISSYTAFSRLLLILRSFHVNPEKCKMILRPDKDT
LTQAHHVWPSLTDEEWISVEVQLKDLILSDYGKKNNVNVASLTQSEVRDIILGMEIAPPS
MQRQEIAEIEKNAKEASQLNAVTTRTTNVHGEELIVTTTSAYEQQTYASKTDWRVRAISA
SNLHLRTSHIYVSSDECSETGYTYILPKNVLKKFIQIADLRTQVSGYLYGVSPPDNPQVK
ELRGIVMVPQWGSHQTVHLPSALPDHEYLKGMEPLGWLHTQPNELPQLSPNDVTTHARIM
SENKSWDGERTVVITCSFTPGSVSLCAYKLTPAGYEWGRQNRDVGANPHGYLPTHYEKVQ
MLLSDHFLGFFMVPDNDVWNYNFMGVRHSSSMKYDLKLANPRDFYHQIHRPSHFLNFSSV
DEGGAEGVDRDDHFA
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgagtgggctgccacctggctacccgtacggggctgccgggcagccgcccgggtatggc
gggccgccgccgccgttccctgggatggcgccgcctggtatgcagccgccgcccgggtat
ggcgggccgccgccgccgttccctgggatggcgccgcctggtatgcagccgccaccagga
atgatgccgccgccgggcatgatgccgccgccgggcatgatgccgccgccgggcatgatg
ccgccgcctgggatgcatccgggcgcgccgatggcgccgcccccgagcggggccggcgac
gccgacatggaggatgccgacggcgcacctagcgcggagatgctcgagcgcgcgcgaaag
tggcagtcgctcaacgcgcggcgctacggcgagcggcgcaagcacgggcacatcgacgcg
cccaaggaggacatgcctccggagcacgtgcgcaagatcgtcaaggaccacggcgacatg
accaacaagaagtttcggcacgacaagcgcgtctacctcggggcgctcaagtacgtgcct
cacgccgtcctcaagctgctcgagaacatgccgatgccgtgggagcagatccgcacggtg
ccaatcctctaccacatcacgggcgccatcaccttcgtcaacgacatccccaagggctac
aacatgctcaacctgctcatccaccgcaagaacgtcaactacctgcacctcgactacaac
ttcaacctcaagcccgtcaagactctcaccaccaaggagcgcaagaagtcgcgcttcggc
aacgccttccacctctgccgcgagatcctccgcctcaccaagctcgtcgtcgacgcgcac
gtgcagtaccggctcggcaacgtggacgcgtaccagctggcggacgggctgcagtacatc
tttgcgcacgtggggcagctcaccgggatgtatcggtacaagtaccggctcatgcggcag
atccggatgtgcaaggacctcaagcacctcatctactaccgcttcaacaccggccccgtc
ggcaagggccccggctgcggcatctgggcgcccggctggcgcgtgtggctcttcttcctg
cgcggcgtggtgccgctgctcgagcggtggctcggcaacctgctcgcacgccagttcgag
ggccgctcgtccaaggggatcgccaagacggtcaccaagcagcgcgtcgagtcgcactac
gacctcgagctgcgcgccgccgtgatgcacgacatcctggacatgatgcccgagggcgtc
aagaccaacaagtcgcgcacgatcctgcagcacctctcggaggcgtggcgctgctggaag
gccaacatcccgtggaaggtgcccggcatgccggcgccgatcgagaacatgatcttgcgg
tacgtcaagtccaaggcggactggtggaccaacgtcgcgcactacaaccgcgagcgcatc
cggcgtggcgccaccgtcgacaagacggtcaccaagaagaacctcgggcggctgacgcgc
ctctggctcaaggcggagcaggagcgccagcacaactacctcaaggacgggccctacgtc
tctgccgaggaggctgtggcgatctacaccaccatggtgcactggctcgagtcgcgcaag
ttctcgccgatccccttcccgccgctctcgtacaagcacgacaccaagctgctcatcctc
gcgctcgagcggctcaaggagtcgtactcggccgcctcgcgcctcaaccagacgcagcgc
gaggagctcggcctcatcgagcaggcctatgacaacccgcacgaggcgcgtgccgcgctc
tcgcgcatcaagcgccacctgctgacgcagcgcgccttcaaggaggtgacgatggagttc
atggacctctactcgcatctcgtccccgtctacgagatcgagccgctcgagaagatcacc
gacgcctacctcgaccagtacctgtggtatgagagcgacaagcgacacctgctgcccaac
tgggtcaagccggccgacacggagccggcgcccctcctcgtctacaagtggtgcctcggc
gtcaacaacctggcggacgtgtgggacacgtccaacggcgagtgcgtcgtctgcgtcgag
acgcagtacaccaagatgtacgagaaggtgctcgaccacaacatcgccgactacatgacc
gccaagaacaacgtcaacctcaccttcaaggacatgaaccacaccaactcgtacggcatc
ctgcgcggcctgcagtttgcctccttcatcatgcagttctacgggctgatgcttgacctg
ctcgtgctcgggctcacgcgcgcctcggagctcgcgggcccgccagccgtgccaaacgac
tttttgcagttccgcgacaccgccaccgagacgcgccacccgatccggctctactgccgg
tacatcgaccggctgcacatcctgctgcgcctcacggctgacgagtgcaaggacctgatc
cagcggtacctgaccgagcatccggaccccaacaacgagaacatggttggctacaacaac
cgcaagtgctggccacgcgactcgcgcatgcggctgatgaagcacgacgtgaacctcggc
cgcgccgtcttttgggacatgaagaaccggctgccgcgctcggtgacgacgatcgactgg
gaggagtccttcgtctcggtctactcgaaggacaacccgaacctgctgttcaacatgagc
ggtttcgaggtgcgcatcctgcccaagatgcgcatgctcaacgacgagttcgtctccaag
gacggcgtctggtcgctgcagaatgagaccaccaaggagcggacggcgcaggccttcctg
cgggtcgacaaccagtcgatgcgctactttgagaaccgcgtgcggcaggtgctcatgtcg
tccggctccaccaccttcaccaagatcgtcaacaagtggaacacggccctcatcgggctg
atgacgtacttccgcgaggcagcgcacatcccgacgcgcgggctcggccggcacgcgccc
cgtgacgcgcccgcggccccgtccgacaggcgacggctcaactcgaagatgccctcgcgc
ttcccgcccgtcgtcttctacacgccgaaggagattggcggcctcggcatgctctcgatg
ggccacgtgctcatcccgcagtcggacttgcggttctcgaagcagacggacgccggcatc
acgcacttccgctcgggcatgtcgcacgaggaggaccagctgatcccgaacctcttccgg
tacatccagccgtgggagtccgagttcgtcgactcgcagcgcgtttgggccgagtacgcg
ctcaagcggcaggaggccaacgcgcagaaccggcggctgacgctcgaggacctcgaggac
tcgtgggaccgcggcatcccgcgcatcaacacgctcttccagaaggaccggcacacgctc
gcgtacgacaagggctggcgcgtccgcacccagttcaaggagttccagatcatgcggcag
aacccgttttggtggacgcaccagcggcacgacggcaagctgtggaacctaaacaactac
cggacggacatgatccagtcgctcggcggcgtcgaggggatcctcgagcacacgctcttc
aagggcacctacttccccacctgggagggcctcttctgggagaaggcctccggcttcgag
gagtcgatgaagtacaagaagctgaccaacgcgcagcgcgaagggatggcctcgccacac
gaccacacgcacaaccttattcaaatcccgaaccgccgcttcacgctgtggtggtcgccg
acgatcaaccgcgccaacgtctacgtcggcttccaggtccagctcgacctcaccggcatc
ttcatgcacggcaagatcccgacgctcaagatctcgctcatccagatcttccgcgcgcac
ttgtggcagaagatccacgagtcggtggtgatggacctctgccaggtcttcgaccaggag
ctcgacgcgcttgagattgagacggtgcagaaggaaaccatccacccgcgcaagtcgtac
aagatgaactcgtcgtgcgccgacgtgctcctcttcgccgcgtacaagtggcaggtctcc
aagcccgcgctgctcgccgagcccaaggacgtgtacgacggctcgacggccacaaagtac
tggctggacgtgcagctgcggtggggcgactacgactcccacgacgtcgagcggtacacg
cgcgcaaagttcctcgactacaccaccgacaacatgtccatctaccccgcgccgactggc
atcatgatcggcctcgacctcgcctacaacctgcactcggcgtacggcaacttcatcccc
gggatgaagccgctggtgacgcaggcgctcgccaagatcatgaagtccaacccggcgctc
tacgtgctgcgcgagcgcatccgcaaggggctgcagctctactcgtccgagccgactgag
ccgtacctctcctcgcaaaactacggcgagctcttctccaaccagatcatctggttcgtc
gacgacaccaacgtgtaccgcgtcaccatccacaagacgttcgagggcaacctgaccacc
aagccgatcaacggcgccatcttcatcttcaacccgcgcaccggccagctcttcctcaag
atcatccacacttccgtctgggccggccagaagcggctcggccagctcgcaaagtggaag
acggcggaggaggtcgccgcgctgatccgctcgctgccggtggaggagcagcccaagcag
atcatcgtgacgcgcaagggcatgctcgacccgctcgaggtgcacctgctcgacttccca
aacatcatgatcaagggctcggagctgcagctccccttccagtcctgcctcaaggtcgag
aagttcggcgacctgatcctcaaggcgacggagccgcagatggtgctcttcaacatctac
gacgactggctcaagacgatctcgtcgtacacggccttctcgcgcctcctcctcatcctg
cgctccttccacgtcaaccccgaaaagtgcaagatgattctccggcccgacaaggacacg
ctgacgcaggcgcaccacgtgtggccgtcgctcactgacgaggagtggatctcggtcgag
gtgcagctcaaggacctgattctctccgactacggcaagaagaacaacgtcaacgtcgcc
tcgctcacccagtccgaggtgcgcgacatcatcctcggcatggagatcgcgccgccgtcg
atgcagcggcaggagattgccgagatcgagaagaacgccaaggaggcgtcgcaactcaac
gcggtgacgacgcgcacgaccaacgtgcacggcgaggagctcatcgtcaccaccacctcc
gcctacgagcagcagacctacgcctccaagacggactggcgcgtgcgcgccatctcggcc
tccaacctgcacctgcgcacctcgcacatctacgtgtcgtccgacgagtgctccgagacg
ggctacacctacatcctgcccaagaacgtgctcaaaaagttcatccagattgccgacctc
cgcacccaggtctcgggctacttgtacggcgtctcgccgcccgacaacccgcaggtcaag
gagctgcgcggcatcgtgatggtcccgcagtggggctcgcaccagacggtgcacctgccg
tcggcgctgcccgaccacgagtacctcaaggggatggagccgctcggttggctccacacg
cagcccaacgagctgccgcagctctcgcccaacgacgtgacgacgcacgcgcgcatcatg
tcggagaacaagtcgtgggacggcgagcgcaccgtcgtcatcacttgctccttcacgccg
ggctccgtctcgctgtgcgcgtacaagctgacccccgcgggctacgagtgggggcgccag
aaccgcgacgtgggcgccaacccgcacggctacctgccgacccactacgagaaggtgcag
atgctcctctcggaccactttctcggcttcttcatggtgccggacaacgacgtgtggaac
tacaactttatgggtgtgcgccactcgtcgagcatgaagtacgacctcaagctcgccaac
ccgcgcgacttttaccaccagatccaccggccgtcccactttctcaacttctcctccgtc
gacgagggcggcgccgagggcgtggaccgcgacgaccactttgcatga
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