Emiliania huxleyi: EMIHUDRAFT_462691
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Entry
EMIHUDRAFT_462691 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
ehx
Emiliania huxleyi
Pathway
ehx03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
EMIHUDRAFT_462691
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ehx03021
]
EMIHUDRAFT_462691
03019 Messenger RNA biogenesis [BR:
ehx03019
]
EMIHUDRAFT_462691
Transcription machinery [BR:
ehx03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
EMIHUDRAFT_462691
Messenger RNA biogenesis [BR:
ehx03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
EMIHUDRAFT_462691
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-RanBP
Torus
zf-CCCH_4
zf-CCCH_2
zf-CCHC
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
17277295
NCBI-ProteinID:
XP_005784452
JGI:
Emihu1_462691
UniProt:
R1D983
LinkDB
All DBs
Position
Unknown
AA seq
276 aa
AA seq
DB search
MDVIEDDDFDLDEMLGVETAEEPAPSDQPPDPRRHRVVCKHWLRGLCKRGDDCDFLHVSD
CPWYDRGFCKHGPRCRNRHTRKTVCVHYLAGFCPNGPDCKFAHPQFALPVLTPRNEGPTY
GGTGAGIGGGGDAAAGGGGGGGGGGGGGGGGGDLSGARDFASVTCFKCWEKGHYANRCPN
GRRENPQPAGQGGGGAPQPGENGNWLCPACSNVNFPMRIVCNRCKAPRPDRQAGGLGGGG
GGPGGAGAGGAFAGGQQSQQMLQLMNSMMQQQQGFM
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgatcgaggatgacgatttcgacctcgacgagatgctcggcgtcgagaccgcc
gaggagccggcgccgagcgaccaaccgcccgacccacgccggcaccgcgtggtgtgcaag
cactggttgcgagggctgtgcaagcgcggcgacgactgcgacttcctccacgtgtccgac
tgcccttggtacgaccgcggcttctgcaagcacggcccgcgctgcaggaaccggcacacg
cggaagacggtctgtgttcactacctcgccggcttctgccccaacgggcccgactgcaag
tttgcgcacccgcagtttgcgctgccagtcctcacgccgcgcaacgaaggcccaacgtac
ggaggcacgggcgccggcatcggaggaggcggcgacgcggcggcgggcggcggcggcggc
ggcggcggcggcggcggcggcggcggcggcggcggcgatctcagtggcgcgcgcgacttc
gcctcggtgacttgcttcaagtgctgggagaaggggcactacgcgaaccgctgccccaac
gggaggcgcgagaacccgcagccggccgggcagggcggcggcggcgcgcctcagccgggc
gagaatggcaactggctctgcccggcttgctccaacgtcaacttccctatgagaatcgtg
tgcaaccggtgcaaggctccgcggccggacagacaggcggggggcctaggcggaggggga
ggggggcctggcggcgccggcgccggcggcgcgttcgccggcgggcagcagtcgcagcag
atgttgcagctgatgaacagcatgatgcagcagcagcaggggttcatgtag
DBGET
integrated database retrieval system