KEGG   Emiliania huxleyi: EMIHUDRAFT_462691
Entry
EMIHUDRAFT_462691 CDS       T02915                                 
Name
(RefSeq) hypothetical protein
  KO
K14404  cleavage and polyadenylation specificity factor subunit 4
Organism
ehx  Emiliania huxleyi
Pathway
ehx03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:ehx00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    EMIHUDRAFT_462691
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:ehx03021]
    EMIHUDRAFT_462691
   03019 Messenger RNA biogenesis [BR:ehx03019]
    EMIHUDRAFT_462691
Transcription machinery [BR:ehx03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     EMIHUDRAFT_462691
Messenger RNA biogenesis [BR:ehx03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     EMIHUDRAFT_462691
SSDB
Motif
Pfam: zf-CCCH zf_CCCH_4 zf-RanBP Torus zf-CCCH_4 zf-CCCH_2 zf-CCHC zf-CCHC_3
Other DBs
NCBI-GeneID: 17277295
NCBI-ProteinID: XP_005784452
JGI: Emihu1_462691
UniProt: R1D983
LinkDB
Position
Unknown
AA seq 276 aa
MDVIEDDDFDLDEMLGVETAEEPAPSDQPPDPRRHRVVCKHWLRGLCKRGDDCDFLHVSD
CPWYDRGFCKHGPRCRNRHTRKTVCVHYLAGFCPNGPDCKFAHPQFALPVLTPRNEGPTY
GGTGAGIGGGGDAAAGGGGGGGGGGGGGGGGGDLSGARDFASVTCFKCWEKGHYANRCPN
GRRENPQPAGQGGGGAPQPGENGNWLCPACSNVNFPMRIVCNRCKAPRPDRQAGGLGGGG
GGPGGAGAGGAFAGGQQSQQMLQLMNSMMQQQQGFM
NT seq 831 nt   +upstreamnt  +downstreamnt
atggacgtgatcgaggatgacgatttcgacctcgacgagatgctcggcgtcgagaccgcc
gaggagccggcgccgagcgaccaaccgcccgacccacgccggcaccgcgtggtgtgcaag
cactggttgcgagggctgtgcaagcgcggcgacgactgcgacttcctccacgtgtccgac
tgcccttggtacgaccgcggcttctgcaagcacggcccgcgctgcaggaaccggcacacg
cggaagacggtctgtgttcactacctcgccggcttctgccccaacgggcccgactgcaag
tttgcgcacccgcagtttgcgctgccagtcctcacgccgcgcaacgaaggcccaacgtac
ggaggcacgggcgccggcatcggaggaggcggcgacgcggcggcgggcggcggcggcggc
ggcggcggcggcggcggcggcggcggcggcggcggcgatctcagtggcgcgcgcgacttc
gcctcggtgacttgcttcaagtgctgggagaaggggcactacgcgaaccgctgccccaac
gggaggcgcgagaacccgcagccggccgggcagggcggcggcggcgcgcctcagccgggc
gagaatggcaactggctctgcccggcttgctccaacgtcaacttccctatgagaatcgtg
tgcaaccggtgcaaggctccgcggccggacagacaggcggggggcctaggcggaggggga
ggggggcctggcggcgccggcgccggcggcgcgttcgccggcgggcagcagtcgcagcag
atgttgcagctgatgaacagcatgatgcagcagcagcaggggttcatgtag

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