Eumetopias jubatus (Steller sea lion): 114201157
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Entry
114201157 CDS
T07240
Symbol
COL1A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(I) chain
KO
K06236
collagen type I alpha
Organism
eju
Eumetopias jubatus (Steller sea lion)
Pathway
eju04151
PI3K-Akt signaling pathway
eju04510
Focal adhesion
eju04512
ECM-receptor interaction
eju04611
Platelet activation
eju04820
Cytoskeleton in muscle cells
eju04926
Relaxin signaling pathway
eju04933
AGE-RAGE signaling pathway in diabetic complications
eju04974
Protein digestion and absorption
eju05146
Amoebiasis
eju05165
Human papillomavirus infection
eju05205
Proteoglycans in cancer
eju05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
eju00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
114201157 (COL1A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
114201157 (COL1A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
114201157 (COL1A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
114201157 (COL1A1)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
114201157 (COL1A1)
09152 Endocrine system
04926 Relaxin signaling pathway
114201157 (COL1A1)
09154 Digestive system
04974 Protein digestion and absorption
114201157 (COL1A1)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
114201157 (COL1A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
114201157 (COL1A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
114201157 (COL1A1)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
114201157 (COL1A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
114201157 (COL1A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
eju00536
]
114201157 (COL1A1)
Glycosaminoglycan binding proteins [BR:
eju00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114201157 (COL1A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
114201157
NCBI-ProteinID:
XP_027949502
LinkDB
All DBs
Position
Unknown
AA seq
1454 aa
AA seq
DB search
MFSFVDLRLLLFLAATALLTRGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD
NGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETTGVEGPQAPPGPAGPPG
RDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPSGPRGLP
GPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGERGPPGPQ
GARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPRGLPGER
GRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSEGPQGVR
GEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPSGPPGPK
GNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPPGERGGP
GSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSPGSPGPD
GKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPPGAVGPA
GKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVPGDLGAP
GPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAPGLQGMP
GERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEAGPSGPA
GPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPAGPTGPP
GPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKEGGKGPR
GETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLPGQRGER
GFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSPGRDGSP
GPKGDRGETGPSGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGARGPSGPQ
GPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPPGSAGSP
GKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQPPQEKAH
DGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKMCHSDWK
SGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPHVAQKNWYISKNPKDKRHVWYGESM
TDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNLKKALLL
QGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPIIDVAPLDVGAP
DQEFGMDVGPVCFL
NT seq
4365 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcttcttagcggccaccgccctcctgacg
cgcggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
ctcaggtactatgaccgagacgtttggaaacccgaggcctgtcggatctgtgtctgcgac
aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgtcccggcgcc
caagtccccccgggcgagtgctgccccgtctgccccgacggcgaggcgtctcctaccgac
caagaaaccacaggagtcgagggtcctcaagcgcctcccggacctgccggcccccctggc
cgagatggcatccccggacagcctggacttcccggaccccccggacctcccggacccccc
ggaccccctggcctcggaggaaactttgctccccaaatgtcttatggctacgatgagaaa
tcaactggaggaatctccgtgcctggccccatgggtccttctggtcctcgtggtctccct
ggcccccccggtgcacctggtccccaaggtttccagggcccccctggtgagcccggcgag
cctggagcctcaggtcccatgggtccccgtggtccccctggcccccctggcaagaatgga
gatgatggtgaagccggaaagcctggtcgtcctggtgagcgtggaccgcctggacctcag
ggtgctcggggattgcctggaacagctggccttcctggaatgaagggacacagaggtttc
agtggtttggatggtgccaagggagacgctggtcctgctggccccaagggtgagcccggt
agccctggtgaaaacggagctcctggtcagatgggcccccggggtctgcctggtgagaga
ggtcgccccggagcccccggccctgctggtgctcgtgggaacgatggtgctactggtgct
gctggaccccccggtcccactggccccgccggtccccctggattccctggtgctgttggt
gctaagggtgaagctggtccccaaggagcccgtggctctgaaggtccccagggtgtgcgt
ggtgagcccggcccccctggccctgctggtgctgctggccctgctggaaaccctggtgct
gacggacagccgggtgctaaaggtgctaacggcgctcctggcattgctggtgctcccggc
ttccctggtgcccgaggcccctctggaccccagggccccagtggtcctcctggtcccaag
ggtaacagcggtgaacctggtgctcctgggaacaaaggagacactggtgccaagggagag
cccggccccactggtattcaaggcccccctggccctgctggggaagaaggaaagcgagga
gcccgaggtgaacccggacccaccggcctgcccggaccccccggcgagcgtggtggccct
ggtagccgtggtttccctggggcagacggcgtcgctggtcccaagggccccgctggtgaa
cgtggttcccccggccccgctggccccaagggttctcctggtgaagctggtcgccctggt
gaagctggtctgcctggtgccaagggtctgactggaagtcccggcagccctggtccagat
ggcaaaaccggcccccctggtcccgctggtcaagatggtcgccccggacccccaggcccc
cccggtgcccgtggtcaggccggcgtgatgggattccctgggcctaaaggtgctgctgga
gagcctggcaaggccggagagcgaggtgtgcctgggccccctggtgctgttggtcctgcc
ggcaaagatggagaagctggagctcagggagcccccggccctgctggccccgctggtgag
agaggtgaacaaggccccgctggctcccccggattccagggtctccctggccccgctggt
cctcctggtgaagcaggcaagcccggtgaacagggtgttcctggcgaccttggtgccccc
ggcccctccggagcaagaggcgagagaggtttccccggtgaacgcggcgtgcaaggcccc
cccggccccgcaggtccccggggagctaacggtgcccctggcaatgatggtgctaagggt
gatgctggtgcccccggagccccaggtagccagggcgctcctggccttcagggaatgcct
ggtgaacgaggcgcagctggtcttcccggccctaagggtgacagaggcgatgctggtccc
aaaggtgctgatggttctcctggcaaggatggtgtccgtggtctgactggccccattggt
cctcctggccccgctggtgcccctggtgacaagggtgaagctggtcctagcggccccgct
ggtcccactggagctcgtggtgcccccggagaccgtggtgagcctggtccccccggccct
gctggcttcgctggcccccctggtgccgacggccaacctggtgctaaaggcgaacctggt
gatgctggtgctaaaggcgacgctggcccccctggccctgctggccccactggcccccct
ggccccattggtaacgttggtgctcctggacccaaaggtgctcgtggcagtgccggtcct
cctggtgctactggttttcctggtgctgctggccgagtcggcccccccggcccctctgga
aatgctggaccccctggccctcctggccctgctggcaaagaaggcggcaaaggcccccgt
ggtgagaccggccccgccggacgtcccggtgaagtcggcccccccggcccccccggcccc
gctggcgagaaggggtcccctggtgctgacggacctgctggtgctcccggcactcccgga
cctcaaggcattgctggacagcgtggtgtggtgggcctgcccggtcagcgaggagagaga
ggctttcccggtcttcccggcccctctggtgaacctggcaaacaaggtccttctggagca
agtggtgagcgtggcccccctggtcccatgggcccccctggattggctggaccccctggc
gagtctggacgtgagggatctcctggtgctgaaggctcccccggacgagatggttctcct
ggccccaagggtgaccgtggtgagaccggcccttctggaccccctggtgctcctggtgct
cctggagcccctggccccgttggccctgctggcaaaaatggcgaccgtggtgagactggt
cctgctggccctgccggcccgatcggccccgtgggtgctcgtggtccctctggaccccaa
ggtccccgtggtgacaagggtgagacaggcgaacagggtgacagaggcataaagggtcac
cgtggcttctctggtctccagggtccccctggtcctcccggctctcctggtgaacaaggt
ccttccggagcttctggccctgctggtccccgaggtccccccggttctgctggttctcct
ggcaaagacggactcaacggtctcccaggccccattgggccccctggtcctcgtggtcgc
actggtgatgctggtcctgttggtccccccggccctcctggaccccccggcccccccggt
cctcccagcggcggtttcgacttcagcttcctgccccagccacctcaagagaaggctcac
gatggcggccgctactaccgggccgatgatgccaacgtggtccgtgaccgtgacctcgag
gtggacaccaccctcaagagcctgagccagcagatcgagaacatccggagccctgaagga
agccgcaagaacccagcccgcacctgccgcgaccttaagatgtgccactctgactggaag
agcggagaatactggattgaccccaaccaaggatgcaacctggatgccatcaaggtcttc
tgcaacatggagacaggcgagacctgcgtgtaccccacccagccccatgtggcccagaag
aactggtacatcagcaagaaccccaaagacaagaggcacgtctggtacggcgagagcatg
accgacggattccagttcgagtacggcggccagggctccgatcctgccgatgtagccatc
cagctgacgttcctgcgcctgatgtccaccgaggcgtcccagaacatcacctaccactgc
aagaacagcgtggcctacatggaccagcagactggcaacctcaagaaggccctgctcctc
cagggctccaacgagatcgagatccgggccgagggcaacagccgcttcacctacagcgtc
acctacgacggttgcacgagtcacaccggagcctggggcaagacagtgatcgaatacaaa
accaccaagacctcccgcttgcccatcatcgatgtggcaccattggacgttggcgcccca
gaccaggaattcggcatggatgttggccctgtctgcttcttgtaa
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