Enterobacter kobei DSM 13645: BFV64_18485
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Entry
BFV64_18485 CDS
T04686
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
ekb
Enterobacter kobei DSM 13645
Brite
KEGG Orthology (KO) [BR:
ekb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ekb03016
]
BFV64_18485
Enzymes [BR:
ekb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
BFV64_18485
Transfer RNA biogenesis [BR:
ekb03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BFV64_18485
Prokaryotic type
BFV64_18485
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOP88208
LinkDB
All DBs
Position
complement(3811076..3812125)
Genome browser
AA seq
349 aa
AA seq
DB search
MTDFDNLTYLHGKPLGSGMLKASPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTKQWLCARVPGTTMPDLSQFELEGCKVLEYARHKRK
LRLGALKGNAFTLVLREVSDRSDVEKRLNAINERGVPNYFGAQRFGIGGSNLQGALRWAQ
SDAPVRDRNKRSFWLSAARSALFNQIVSERLKKPDANQVVVGDALQLAGRGSWFVATADE
MADVQSRVDAKSLMITAALPGSGEWGTQGDALSAEQAAVADAQALQSLLVREKVEAARRA
MLLYPQQLSWNWWDDVTVELRFWLPAGSFATSVVRELINTSGDYANIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgacggacttcgataacctgacttatctgcacggtaaaccgctgggttctggcatgctg
aaggccagcccagaagatttcgtggtggttgaggatttggggtttgagccggacggtgaa
ggcgaacatatcctggtacgaattcttaaaaacggctgcaatacccggtttgtggccgat
gcgctggcaaaattcctcaaaattcatgcccgcgaggtgagcttcgccggacagaaagat
aaacacgccgtcaccaaacagtggctgtgtgcgcgcgttcccggcactacgatgcctgat
ttaagccagtttgagctggaaggctgtaaagtgctggaatacgcccgtcacaagcgcaaa
ctgcgcctgggggcgttgaaaggcaatgcgtttacgctggtattgcgtgaagtgtctgac
cgttcagacgttgaaaaacgcctcaacgccatcaatgaacgcggcgtaccgaactacttt
ggcgcccagcgctttggcattggcggcagtaacctgcagggcgcgcttcgctgggcacaa
agcgatgcgccggtgcgcgacaggaataagcgcagtttttggttgtcggcggcccgcagt
gcgttgtttaatcagattgtgagcgaaaggctgaaaaaaccggacgcgaatcaagttgtt
gttggcgatgcgctacaattagcgggacgcggaagctggtttgtggcaacggccgacgaa
atggccgatgtgcagtcgcgcgtggacgcgaaatcgctgatgattaccgccgcgttgccc
ggctccggtgagtgggggacgcagggcgacgcgctgagcgctgagcaggcggctgtcgcc
gatgcgcaggcattacaatcattgctggtgcgggaaaaagtcgaagcagcacgccgcgcg
atgctgctctacccgcagcagctaagctggaactggtgggatgacgtcaccgtcgagtta
cgcttctggctgccggccggtagctttgccaccagcgttgtcagggaacttatcaacacc
tcgggtgattatgcgaatattgctgagtaa
DBGET
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