Escherichia coli KO11FL: KO11_09700
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Entry
KO11_09700 CDS
T02104
Symbol
gabD
Name
(GenBank) succinate-semialdehyde dehydrogenase I
KO
K00135
succinate-semialdehyde dehydrogenase / glutarate-semialdehyde dehydrogenase [EC:
1.2.1.16
1.2.1.79
1.2.1.20
]
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf00250
Alanine, aspartate and glutamate metabolism
ekf00310
Lysine degradation
ekf00350
Tyrosine metabolism
ekf00650
Butanoate metabolism
ekf00760
Nicotinate and nicotinamide metabolism
ekf01100
Metabolic pathways
ekf01120
Microbial metabolism in diverse environments
Module
ekf_M00027
GABA (gamma-Aminobutyrate) shunt
ekf_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
KO11_09700 (gabD)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
KO11_09700 (gabD)
00310 Lysine degradation
KO11_09700 (gabD)
00350 Tyrosine metabolism
KO11_09700 (gabD)
09108 Metabolism of cofactors and vitamins
00760 Nicotinate and nicotinamide metabolism
KO11_09700 (gabD)
Enzymes [BR:
ekf01000
]
1. Oxidoreductases
1.2 Acting on the aldehyde or oxo group of donors
1.2.1 With NAD+ or NADP+ as acceptor
1.2.1.16 succinate-semialdehyde dehydrogenase [NAD(P)+]
KO11_09700 (gabD)
1.2.1.20 glutarate-semialdehyde dehydrogenase
KO11_09700 (gabD)
1.2.1.79 succinate-semialdehyde dehydrogenase (NADP+)
KO11_09700 (gabD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Aldedh
Motif
Other DBs
NCBI-ProteinID:
AFH16914
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All DBs
Position
complement(2055854..2057302)
Genome browser
AA seq
482 aa
AA seq
DB search
MKLNDSNLFRQQALINGEWLDANNGEVIDVTNPANGDKLGSVPKMGADETRAAIDAANRA
LPAWRALTAKERANILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKGEISYAASFIEWFA
EEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAITPWNFPAAMITRKAGPALAAGCTMVLK
PASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGNELTSNPLVRKLSFTGSTEIGRQ
LMEQCAKDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDG
VYDRFAEKLQQAVSKLHIGDGLDKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKA
HERGGNFFQPTILVDVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYA
RDLSRVFRVGEALEYGIVGINTGIISNEVAPFGGIKASGLGREGSKYGIEDYLEIKYMCI
GL
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttaacgacagtaacttattccgccagcaggcgttgattaacggggaatggctg
gacgccaacaatggcgaggtcatcgacgtcaccaatccggcgaacggcgacaagctgggt
agcgtacccaaaatgggcgctgatgaaacccgcgccgctatcgacgccgccaaccgcgct
ctgcccgcctggcgtgcgctcaccgccaaagaacgcgccaacattctgcgcaactggttc
aatttgatgatggagcatcaggacgatttagcgcgtctgatgaccctcgaacagggtaaa
ccgctggctgaagcgaaaggtgaaatcagctacgccgcctcctttattgagtggtttgct
gaagaaggcaaacgcatttatggcgacaccattcccggtcatcaggccgataaacgcctg
attgttatcaagcagccgattggcgttaccgccgccatcacgccgtggaacttcccggcg
gcgatgattacccgtaaagccggtccggcgctggcggcaggctgcacgatggtgctgaaa
cccgccagtcagacgccgttctctgcgctggcgctggcggagctggcgattcgcgcgggc
attccggctggggtatttaacgtggtcaccggttcggcgggcgcagtcggtaacgaactg
accagcaacccgctggtgcgcaaactgtcgtttaccggttcgaccgaaattggccgccag
ttaatggaacaatgcgcgaaagacatcaaaaaagtgtcgctggagctcggcggcaacgcg
ccgtttatcgtctttgacgatgccgacctcgacaaagccgtggaaggcgcgctggcctcg
aaattccgcaacgccgggcaaacctgcgtctgcgccaaccgtttatacgtgcaggacggc
gtgtatgaccgctttgccgaaaaattgcagcaggcggtgagcaaactgcacatcggcgac
gggctggataaaggcgtcaccatcgggccgctgatcgatgaaaaagcagtagcaaaagtg
gaagagcatattgccgatgcgctggagaaaggcgcgcgcgtggtttgcggcggtaaagca
cacgaacgtggcggcaacttcttccagccgaccattctggtggacgttccggccaacgct
aaagtgtcgaaagaagagacgttcggccccctcgccccgctgttccgttttaaagatgaa
gccgatgtgatcgcgcaagccaatgacaccgaatttggtcttgccgcctatttctacgcc
cgtgatttaagccgcgtcttccgcgtgggcgaagcgctggagtacggcatcgtcggcatc
aataccgggattatttccaatgaagtggccccgttcggcggcatcaaagcctcgggtctg
ggtcgtgaaggttcgaagtatggcatcgaagattacttagaaatcaaatatatgtgcatc
ggtctttaa
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