Eutypa lata: UCREL1_178
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Entry
UCREL1_178 CDS
T03103
Name
(GenBank) putative atp-dependent rna helicase dbp-2 protein
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
ela
Eutypa lata
Pathway
ela03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ela00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
UCREL1_178
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ela03041
]
UCREL1_178
03009 Ribosome biogenesis [BR:
ela03009
]
UCREL1_178
Enzymes [BR:
ela01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
UCREL1_178
Spliceosome [BR:
ela03041
]
Complex A
U1 snRNP components
U1 related factors
UCREL1_178
Complex B
UCREL1_178
Ribosome biogenesis [BR:
ela03009
]
Eukaryotic type
Pre-60S particles
Helicases
UCREL1_178
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
ResIII
Motif
Other DBs
NCBI-ProteinID:
EMR72758
UniProt:
M7T789
LinkDB
All DBs
Position
Unknown
AA seq
400 aa
AA seq
DB search
MSYGGGYSQGGGRSYGGGYGGGRDHGGGGGGGGYGSRDGGHNGYGGGNSFGGGGGHGGGD
RMSNLGAGLQKQSWDLGTMPKFEKSFYKEDDAVAARSQTEVDRFRRDHQISIHGQNVPKP
VETFDEAGFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPA
IVHINAQPLLAPGDGPIVLVLAPTRELAVQIQQEITKFGKSSRIRNTCVYGGVPRGPQIR
DLSKGVEVCIATPGRLIDMLEGGKTNLRRVTYLVLDEADRMLDMGFEPQIRKIISQIRPD
RQTLMWSATWPKEVRALASEFQTDFIQVNIGSMDLSANHRITQIVEVVSEGEKREKMIKH
LEKIMDDKENKALIFVGTKRVADDITRFLRQDGWPALCKF
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgtcttacggcggtggttattcccaaggcggtggccgttcttacggaggtggctatggt
ggtggccgcgaccatggcggcggcggcggtggtggtggatatggttcgcgtgatggcggc
cacaatggttacggtggtggaaactcttttggtggaggtggtggccatggcggcggtgat
cgcatgtctaaccttggagctggcttgcagaaacagagctgggaccttggcaccatgccc
aagttcgagaagtctttctacaaggaagatgacgccgttgctgcacgatctcaaaccgaa
gtcgacagattccgccgagatcaccagatcagtattcacggacagaatgtgcccaagcct
gttgagacgttcgatgaagctggtttccctcgctatgtcatggatgaggtgaaggctcaa
ggcttccctgccccgactgccattcaatcccaaggttggcccatggctctttctggtcgc
gacgttgtcggcattgccgagaccggttccggaaagacacttacttattgtcttcccgcc
atcgtccacatcaatgcccaacctctcttggcccccggcgatggtcctattgttcttgtt
cttgcccctacccgagagctggccgttcaaatccagcaggagatcactaagttcggcaag
tcctctcgcattcgcaacacttgcgtctatggtggtgttcctcgtggtcctcagatccgc
gacctttctaagggtgttgaggtctgcattgcgactccgggacgcctgattgacatgctt
gagggaggcaagactaaccttcgccgtgtgacttacttggttcttgacgaggctgatcga
atgttggacatgggttttgagcctcaaattcgcaagatcatctcacagattcgacctgac
cgtcagaccctcatgtggtccgctacttggcctaaggaagttcgcgctctggcttcggaa
ttccaaaccgacttcatccaggtcaacattggctctatggatctctctgctaaccatcgt
attacacaaattgtggaggttgtttcggagggtgagaagcgtgagaagatgatcaagcat
ctcgagaagatcatggacgacaaggagaacaaggctcttatcttcgttggtaccaagcgt
gttgccgacgatatcactcgattccttcgccaggatggctggcccgcactttgtaagttt
taa
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