Escherichia coli clone D i2: i02_3194
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Entry
i02_3194 CDS
T02004
Symbol
xerD
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
eld03036
]
i02_3194 (xerD)
Chromosome and associated proteins [BR:
eld03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
i02_3194 (xerD)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
DUF2064
HTH_52
Motif
Other DBs
NCBI-ProteinID:
AER85736
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All DBs
Position
complement(3222936..3223832)
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AA seq
298 aa
AA seq
DB search
MKQDLARIEQFLDALWLEKNLAENTLNAYRRDLSMMVEWLHHRGLTLATAQSDDLQALLA
ERLEGGYKATSSARLLSAVRRLFQYLYREKFREDDPSAHLASPKLPQRLPKDLSEAQVER
LLQAPLIDQPLELRDKAMLEVLYATGLRVSELVGLTMSDISLRQGVVRVIGKGNKERLVP
LGEEAVYWLETYLEHGRPWLLNGVSIDVLFPSQRAQQMTRQTFWHRIKHYAVLAGIDSEK
LSPHVLRHAFATHLLNHGADLRVVQMLLGHSDLSTTQIYTHVATERLRQLHQQHHPRA
NT seq
897 nt
NT seq
+upstream
nt +downstream
nt
gtgaaacaggatctggcacgcatcgagcagtttcttgatgctctgtggctggaaaaaaat
ctggctgaaaatacgttgaacgcttaccgtcgcgatctgtcaatgatggtggagtggttg
catcaccgcgggttgacgctggcgacggcgcaaagtgacgatttgcaggcattactggca
gaacggctggagggcggatataaagccaccagctcagcgcgtttgctgagtgcagtgcgc
cgattgttccagtatctttatcgcgaaaagtttcgtgaagatgatcccagtgcgcatctc
gcttcaccgaaattgccccagcgtttgccaaaagatttaagcgaagcgcaggtcgaacgt
ttattacaggcaccattaattgatcagccactggagctacgcgataaagccatgcttgaa
gtgttgtatgctaccggactgcgtgtctctgaactggtcgggctgacaatgagtgatatc
agcctgcgtcagggcgtggtgcgggtcattggtaaaggcaacaaagagcgcctggtgccg
ttaggtgaagaggcggtttactggctggaaacctatctggaacatgggcgtccgtggctg
ttgaatggtgtgtcaattgacgtgttgtttcccagccagcgtgcgcagcagatgacgcga
cagaccttctggcaccgcattaaacattatgccgtgctggcgggtatcgacagcgaaaag
ctgtcaccgcatgtgttgcgtcacgcttttgccactcacttattaaatcatggtgcggat
ttgcgcgtggtgcagatgctactgggccacagcgatctctccaccacgcaaatttatacg
catgtcgctaccgagcgtctgcggcaacttcatcaacagcatcacccgcgggcgtga
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