Enhydra lutris kenyoni (northern sea otter): 111146901
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Entry
111146901 CDS
T05871
Name
(RefSeq) collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04151
PI3K-Akt signaling pathway
elk04510
Focal adhesion
elk04512
ECM-receptor interaction
elk04820
Cytoskeleton in muscle cells
elk04926
Relaxin signaling pathway
elk04933
AGE-RAGE signaling pathway in diabetic complications
elk04974
Protein digestion and absorption
elk05146
Amoebiasis
elk05165
Human papillomavirus infection
elk05200
Pathways in cancer
elk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111146901
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111146901
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111146901
09142 Cell motility
04820 Cytoskeleton in muscle cells
111146901
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
111146901
09154 Digestive system
04974 Protein digestion and absorption
111146901
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
111146901
09162 Cancer: specific types
05222 Small cell lung cancer
111146901
09172 Infectious disease: viral
05165 Human papillomavirus infection
111146901
09174 Infectious disease: parasitic
05146 Amoebiasis
111146901
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111146901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
elk04147
]
111146901
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111146901
Exosome [BR:
elk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
111146901
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111146901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
111146901
NCBI-ProteinID:
XP_022358346
UniProt:
A0A2Y9JCN3
LinkDB
All DBs
Position
Unknown
AA seq
1679 aa
AA seq
DB search
MVPRLGFWLLLLAAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGASGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGHVPGTLLKGERGFPGP
PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVKEKGDFATKGEKGQKGEPGFQGMPGLGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDTGYPGLPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGTPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQIGAPGFPGERGEKGEQGFPGTSLPGPSGRDGLPGPPGPPG
PPGQPGHTNGIVECQPGPPGAQGPPGIPGQPGLTGEVGEKGQKGDSCLICDTAGLRGPPG
PQGPPGEIGFPGQPGAKGDRGLPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGFGLPGPVGDKGQVGFPGNPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGSPGFP
GPQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGSPGVPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAVGPPGLQGI
RGDPGPPGLQGPRGAPGAPGVGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG
LPGEKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDEVHMGSMKGQKGDQGEKGQTG
PTGEKGSRGDPGTPGVPGKDGQAGHPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVTGFPGSPGE
KGEKGSAGMPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDKGLPGSDGIPGIKGEAGLPGK
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP
GIPGSKGEQGFMGPPGPQGQPGLPGAPGHAMEGPKGDRGPQGQPGLPGLPGPMGPPGLPG
LDGLKGDKGNPGWPGAPGTPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGVKGDPGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGLKGLPGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPFGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINDVCNFASRNDYSYWLSTPEPMPMSMAPIAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERNEMFKKPTPSTLKAGELRTHVSRCQVCMRRTIVRVLNTNHN
NT seq
5040 nt
NT seq
+upstream
nt +downstream
nt
atggtgccccggctcggcttctggcttctgctgctggccgccgccctcctgctccacgag
gagcgcagccgggccgctgcgaagggtggttgtgctggctctggctgtgggaagtgtgac
tgtcatggagtgaagggacagaagggcgaaaggggcctcccggggttgcaaggtgtcatc
gggtttcccgggatgcaaggacccgaggggccgcagggaccaccaggacagaagggtgac
actggagaacccggcctgcccggaacgaaagggacaagaggacccccaggagcatcgggt
taccccggaaacccaggactgccgggtattcctggccaagacggtccccccggtcctcca
ggtatccccggatgcaatggaacaaagggtgagccagggcctctggggcccccgggtttg
cctggattcgctggaaatcccggacctccagggttaccaggaatgaagggggatcccggt
gaaatcattgggcatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc
ccaggagcgccaggctcgccgggactgccaggccttcagggtcctgttggccctccagga
tttactggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaagggccaaaaggtgacaagggtgaccagggggtcagtgggcctccg
ggagtgccaggacaagctcaagttaaagaaaaaggagactttgccaccaaaggagaaaag
ggtcaaaaaggtgaacctggatttcaaggaatgccagggcttggagagaaaggggagccc
ggaaagccagggccccgaggaaaacctggaaaagatggcgaaaaaggagaaaaagggagt
ccaggctttccaggcgacacggggtacccgggactcccaggccgcgaaggtttcaaggga
gacaaaggtgaagcaggtcctccaggcccacctggaattgcaatcggcccaggacccttg
ggagaaaaaggagagcgggggtacccgggcaccccagggttgagaggagagccaggcccc
aaaggtttcccgggattgcaaggccagccaggccctccaggctttccagtaccagggcag
atcggagctcctggattcccgggggaaagaggcgagaaaggtgaacagggctttccgggc
acatctttgccaggaccgagcggacgggatggactcccgggcccccctgggcctcccggg
ccccctggacagccgggccacacaaatggaatcgtggaatgccagcctgggccgccaggg
gcccagggcccccccggaattccagggcagccagggctgacgggcgaggttggagaaaaa
ggtcagaaaggagacagctgcctcatctgtgacacagcgggacttcgtgggccccctggg
ccgcagggccccccgggagaaataggtttcccaggacagccaggggccaagggcgacaga
ggcttgcctggcagagatggtctggaaggattgcctggcccgcaaggcgcaccagggctg
atgggccagccgggagccaagggagagcctggcgagatttacttcgacgcacggctcaaa
ggagacaaaggagacccgggctttccaggacagcctgggatgccaggcagagcagggtct
cctgggagagacggccatccgggtctgcccggccccaaaggctccccggggtcggtagga
ctgaaaggagagcgtggcccccccgggggagttggattccccggcagtcgcggtgacacc
ggccctccagggcctccagggttcggccttcctggccccgttggcgacaagggacaagtg
ggttttccagggaaccctggctccccaggccagccaggtcccaagggcgaagcaggaaaa
gttgtgcccctaccgggtccccccggagcacaaggacttccgggatccccaggcttcccc
gggccgcaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag
aagggcactgtcggccagcccggaatcggatttccagggccccctggccccaaaggtgtt
gacggcttgcctggggacgtggggcctcctggcagtccaggccgcccggggttcaatggc
ttacccggcagtccgggtgtgcccggccaaaagggggagccgggagttggtctaccagga
ctcaaaggcttgccaggcattcccggcattcctggcacacccggggagaaggggaacgtc
gggggaccaggcgtcccgggagagcacggtgctgtcggccccccaggccttcagggaatc
agaggtgacccagggccgcctggattacaaggtcccagaggagctccaggagcccctgga
gttggcccgcctggcgcaatgggaccccctggaggacagggaccgccagggtcctcaggc
cctcccggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccaggt
cccaaaggagataaagggtcccaagggctaccaggcctgacgggacagtcggggctccct
ggtctccccggacagcagggcacccctggcgttcctgggtttccaggtcccaagggggag
atgggcgtcatgggaaccccagggcagcccggctccccaggaccagcgggcctgccagga
ttaccaggagagaaaggggaccacggcttcccgggctcctcggggccccggggtgaccct
ggcttcaagggggacaaaggagacgtgggtctccctggcaagccgggctccatggatgag
gtgcacatgggcagcatgaagggccagaagggagaccaaggagagaaagggcaaactgga
ccaaccggcgagaaggggtcccggggcgaccccggaaccccaggagtgcctggaaaggac
ggccaggccgggcatcctgggcagccaggacctaaaggggacccaggcataggtggaacc
ccgggcgctccaggtctccctggacccaaaggatcggttggtggaatgggcctgccagga
acgcccggagaaaagggggtgcctggaatccccggcccgcagggcgtccctggcttaccc
ggggagaagggagcaaaaggagagaaaggacaggcgggcctacctggcattggaattccg
ggccgtcctggggacaagggagatcaaggggtcacaggctttccggggagtcctggagag
aagggagagaaaggaagcgctggcatgccgggggtccccggctccccaggccccaaagga
tcgccggggagtgtcggctacccaggaagccctgggttgcccggagaaaaaggggacaaa
ggtctcccaggatcggacggcattcccggcatcaagggagaagcaggtcttcctgggaag
cccggccccacaggccccgctggccagaaaggggagcccggcagtgacggaatcccaggg
tcggcgggagagaagggtgaaccaggtctgcccggaagaggattcccagggtttccaggg
gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccggcagccca
ggcatccccgggtccaaaggagagcaaggattcatgggtcccccggggccacaaggacag
ccgggcttacctggagctccaggccacgctatggaaggacccaagggagaccggggccca
cagggtcagcccggcctgccagggcttccgggacctatggggcctccggggctccctggg
cttgacggactcaaaggtgacaaaggaaacccaggctggccgggggcccccggaacccca
ggacccaagggagagccaggattccagggcctgcctgggattggtggctcgccagggatc
acgggctcgaagggtgacatggggcctccaggagtgccaggatttcaaggtcagaaaggc
ctccctggcctgcagggagtgaagggggatccaggtgaccaaggcttcccgggaagtaaa
ggccttcccggtcccccagggcccccgggaccctacgacatcatcaaaggggagccaggg
cttcctggccccgagggtcctgcaggtctgaaggggctcccagggcctccaggccccaaa
ggacagcaaggcgtgacgggatccgtgggcttacctggaccgcccggtgttcctggtttt
gacggcgcccctggccagaaaggagagacgggccccttcggtccccctggtccacgaggg
ttcccgggcccgccaggccccgacggcttgccaggatccatgggccccccgggcaccccg
tctgtggatcacggcttccttgtgaccaggcacagtcagacaacggatgacccacagtgt
cctcctgggaccaaaattctttaccacgggtactccttgctctacgtgcagggcaacgaa
cgggcccacggccaggacctaggcacggccgggagctgcctgcgcaagttcagtacgatg
cctttcctcttctgcaacatcaacgacgtgtgcaacttcgcctcccggaacgactactcc
tactggctgtccacacccgagcccatgcccatgtccatggcgcccatcgccggggacaac
atcagaccgttcatcagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccatccagatcccgccgtgccccagcggctggtcctccctctggattggc
tactccttcgtcatgcacaccagtgccggcgctgaaggttccggccaggccctggcgtcc
ccgggctcttgtctggaggagttcaggagcgcgccgttcatcgagtgccacggccgcggg
acgtgcaactactacgccaacgcttacagcttctggcttgccacgatcgagagaaacgag
atgttcaagaagcccacgccgtccaccttgaaggccggggagctgcgcacacacgtcagc
cgttgccaggtctgcatgaggagaaccatcgtcagggttttaaacactaatcacaactga
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