Enhydra lutris kenyoni (northern sea otter): 111151317
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Entry
111151317 CDS
T05871
Name
(RefSeq) collagen alpha-1(I) chain isoform X1
KO
K06236
collagen type I alpha
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk04151
PI3K-Akt signaling pathway
elk04510
Focal adhesion
elk04512
ECM-receptor interaction
elk04611
Platelet activation
elk04820
Cytoskeleton in muscle cells
elk04926
Relaxin signaling pathway
elk04933
AGE-RAGE signaling pathway in diabetic complications
elk04974
Protein digestion and absorption
elk05146
Amoebiasis
elk05165
Human papillomavirus infection
elk05205
Proteoglycans in cancer
elk05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
111151317
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111151317
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111151317
09142 Cell motility
04820 Cytoskeleton in muscle cells
111151317
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
111151317
09152 Endocrine system
04926 Relaxin signaling pathway
111151317
09154 Digestive system
04974 Protein digestion and absorption
111151317
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
111151317
09172 Infectious disease: viral
05165 Human papillomavirus infection
111151317
09174 Infectious disease: parasitic
05146 Amoebiasis
111151317
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
111151317
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
111151317
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
elk00536
]
111151317
Glycosaminoglycan binding proteins [BR:
elk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
111151317
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
VWC
Motif
Other DBs
NCBI-GeneID:
111151317
NCBI-ProteinID:
XP_022364932
UniProt:
A0A2Y9JV16
LinkDB
All DBs
Position
Unknown
AA seq
1460 aa
AA seq
DB search
MFSFVDLRLLLLLAATALLTHGQEEGQEEDIPPVTCVQNGLRYYDRDVWKPEACRICVCD
NGNVLCDDVICDETKNCPGAQVPPGECCPVCPDGEASPTDQETAGVEGPKGDTGPRGPRG
PAGPPGRDGIPGQPGLPGPPGPPGPPGPPGLGGNFAPQMSYGYDEKSTGGISVPGPMGPS
GPRGLPGPPGAPGPQGFQGPPGEPGEPGASGPMGPRGPPGPPGKNGDDGEAGKPGRPGER
GPPGPQGARGLPGTAGLPGMKGHRGFSGLDGAKGDAGPAGPKGEPGSPGENGAPGQMGPR
GLPGERGRPGAPGPAGARGNDGATGAAGPPGPTGPAGPPGFPGAVGAKGEAGPQGARGSE
GPQGVRGEPGPPGPAGAAGPAGNPGADGQPGAKGANGAPGIAGAPGFPGARGPSGPQGPS
GPPGPKGNSGEPGAPGNKGDTGAKGEPGPTGIQGPPGPAGEEGKRGARGEPGPTGLPGPP
GERGGPGSRGFPGADGVAGPKGPAGERGSPGPAGPKGSPGEAGRPGEAGLPGAKGLTGSP
GSPGPDGKTGPPGPAGQDGRPGPPGPPGARGQAGVMGFPGPKGAAGEPGKAGERGVPGPP
GAVGPAGKDGEAGAQGAPGPAGPAGERGEQGPAGSPGFQGLPGPAGPPGEAGKPGEQGVP
GDLGAPGPSGARGERGFPGERGVQGPPGPAGPRGANGAPGNDGAKGDAGAPGAPGSQGAP
GLQGMPGERGAAGLPGPKGDRGDAGPKGADGSPGKDGVRGLTGPIGPPGPAGAPGDKGEA
GPSGPAGPTGARGAPGDRGEPGPPGPAGFAGPPGADGQPGAKGEPGDAGAKGDAGPPGPA
GPTGPPGPIGNVGAPGPKGARGSAGPPGATGFPGAAGRVGPPGPSGNAGPPGPPGPAGKE
GGKGPRGETGPAGRPGEVGPPGPPGPAGEKGSPGADGPAGAPGTPGPQGIAGQRGVVGLP
GQRGERGFPGLPGPSGEPGKQGPSGASGERGPPGPMGPPGLAGPPGESGREGSPGAEGSP
GRDGSPGPKGDRGETGPAGPPGAPGAPGAPGPVGPAGKNGDRGETGPAGPAGPIGPVGAR
GPTGPQGPRGDKGETGEQGDRGIKGHRGFSGLQGPPGPPGSPGEQGPSGASGPAGPRGPP
GSAGSPGKDGLNGLPGPIGPPGPRGRTGDAGPVGPPGPPGPPGPPGPPSGGFDFSFLPQP
PQEKAHDGGRYYRADDANVVRDRDLEVDTTLKSLSQQIENIRSPEGSRKNPARTCRDLKM
CHSDWKSGEYWIDPNQGCNLDAIKVFCNMETGETCVYPTQPQVAQKNWYISKNPKEKRHV
WYGESMTDGFQFEYGGQGSDPADVAIQLTFLRLMSTEASQNITYHCKNSVAYMDQQTGNL
KKALLLQGSNEIEIRAEGNSRFTYSVTYDGCTSHTGAWGKTVIEYKTTKTSRLPVIDVAP
LDVGAPDQEFGMDIGPVCFL
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgttcagctttgtggacctccggctcctgctcctcttagcggccaccgccctcctgact
cacggccaagaggagggccaagaagaagacatcccaccagtcacctgcgtacagaacggc
ctcaggtactatgaccgagacgtatggaaacccgaggcctgccggatctgtgtctgcgac
aacggcaacgtgttgtgcgatgacgtgatctgcgacgaaaccaagaactgtcccggcgcc
caagtccccccgggcgagtgttgccccgtctgccccgacggcgaggcgtcacctacggac
caagaaaccgcaggagtcgagggacccaagggagacactggcccccgaggtccaagggga
cctgccggcccccctggccgagatggcatccccggacagcctggacttcccggacccccc
ggacctcccggaccccccggaccccctggcctcggaggaaactttgctccccagatgtct
tatggctatgatgagaaatcaactggaggaatctccgtgcctggccccatgggtccttct
ggtcctcgtggtctccctggcccccctggtgcacctggtccccaaggtttccaaggcccc
cctggtgagcccggcgagcctggagcctcaggtcccatgggtccccgcggtccccctggt
ccccctggcaagaacggagatgatggtgaagctggaaagcctggtcgtcctggtgagcgt
ggccctcctggacctcagggtgctcgtggattgcctggaacagctggccttcctggaatg
aagggacacagaggtttcagtggtttagatggtgccaagggagatgctggtcctgctggt
cccaagggcgagcctggtagtcctggtgaaaatggagctcctggtcagatgggcccccgt
ggtctgcctggtgagagaggtcgccctggagcccccggtcctgctggtgctcgtggaaac
gatggtgctactggggctgctggaccccccggtcccactggccccgctggtcctcctggc
ttccctggtgctgttggtgctaagggtgaagctggtccccaaggagcccgaggctctgag
ggtccccagggtgtgcgtggtgagcctggcccccctgggcctgctggtgctgctggtcct
gctggaaaccctggtgctgacggacagcctggtgctaaaggtgctaacggcgctcctggc
attgctggtgctcccggcttccccggtgcccgaggcccctctggaccccagggccccagc
ggtcctcctggtcccaagggtaacagcggtgaacctggtgctcccggcaacaaaggagat
actggcgccaagggagagcccggacccactggtattcaaggaccccctggccccgctggg
gaagaaggaaagagaggagcccgaggtgaacctggacccactggcctgcctggaccccct
ggcgagcgtggtggacctggtagccgcggtttccccggtgcagatggtgttgctggtccc
aagggtcctgctggtgaacgtggttcccccggccccgctggccccaaaggttctcctggt
gaagctggtcgccctggtgaagctggtctgcccggtgccaagggtctgactggaagtccc
ggcagccccggtcccgacggcaaaaccggcccccctggtcctgctggtcaagatggtcgc
cccggacccccaggcccccctggtgcccgtggtcaggctggcgtgatgggcttccctggg
cctaaaggtgctgctggagagcccggcaaggctggagagcgaggcgtgcctggtccccct
ggtgctgttggtcctgctggcaaagatggagaagccggagctcagggagcccctggccct
gctggccccgctggtgagagaggtgaacaaggtcccgctggctcccctggattccagggt
ctccctggccccgctggtcctcctggggaagctggcaaacccggcgaacagggtgttcct
ggcgatcttggtgcccccggcccctctggagcacgaggcgagagaggtttccccggtgaa
cgtggcgtgcaaggaccccccggccccgcaggtccccggggagccaatggtgcccctggc
aatgacggtgctaagggtgatgctggtgcccctggagccccaggtagccagggcgctcct
ggccttcagggaatgcctggtgaacgaggtgcagctggtcttcctggtcctaagggtgac
agaggtgatgctggtcccaaaggtgctgacggttctcccggcaaagatggtgtccgtggt
ctgactggccccattggtcctcctggccccgctggtgcccctggtgacaagggtgaagca
ggtcctagtggccctgctggtcccactggagctcgtggcgcccccggagaccgcggtgag
cctggtccccctggccctgctggcttcgctggcccccctggtgctgatggccaacctggt
gctaaaggcgaacccggtgatgctggtgctaaaggcgacgccggtcccccaggcccggct
ggccccactggcccccctggccccattggtaacgttggtgctcctggacccaaaggtgct
cgcggcagtgctggtccccctggtgctaccggtttccctggtgctgctggccgagtcggt
ccccccggcccctctggaaatgctggaccccctggccctcccggccccgctggcaaagaa
ggcggcaaaggtccccgtggtgagactggccccgctggacgtcccggtgaagttgggccc
cccggtccccccggccctgctggagagaaaggatcccctggtgccgacggaccagctggt
gctcctggcactcccggacctcaaggcatcgctggacagcgtggtgtggtcggcctgccc
ggtcagcgaggagagagaggcttccccggtctccccggcccctctggtgaacctggcaaa
caaggtccttctggagccagtggtgaacgtggcccccctggacccatgggcccccctgga
ttggctggaccccctggcgagtctggacgcgagggatctcctggtgctgaaggctcccct
ggacgagatggttctcctggccccaagggtgaccgtggtgagaccggccctgctggaccc
cccggtgctcccggtgctcctggtgcccccggccccgtcggccctgctggcaagaacggc
gaccgcggtgagactggtcctgctggtcctgctggtcccatcggccctgttggagctcgt
ggtcccactggaccccaaggtccccgtggtgacaagggtgagacaggcgaacagggtgac
agaggcataaagggtcaccgtggcttctctggtctccagggtcctcctggtcctcccggc
tctcctggtgaacaaggtccttctggagcttctggtcctgctggtccccgaggtccccct
ggctctgccggctctcctggcaaagacggactcaacggtctcccaggccccatcggcccc
cctggtcctcgcggtcgcactggtgatgccggtcctgttggccctcccggccctcctgga
ccccctggtccccctggtcctcccagcggcggtttcgacttcagcttcctgccccagcca
cctcaagagaaggctcacgatggcggccgctactatcgggctgatgacgccaatgtggtc
cgtgaccgtgacctcgaggtggacaccaccctcaagagcctgagccagcagatcgagaac
atccggagccctgaaggaagccgcaagaacccagcccgcacctgccgtgacctcaagatg
tgccactctgactggaagagcggagaatactggattgaccccaaccaaggatgcaacctt
gatgccatcaaggtcttctgcaacatggagacaggtgagacctgcgtgtaccccactcag
ccccaggtggcccagaagaactggtacatcagcaagaaccccaaggaaaagaggcatgtc
tggtatggcgagagcatgaccgacggattccagttcgagtatggtggccagggctccgat
cctgccgatgtggccatccagctgacgttcctgcgcctgatgtccaccgaggcttcccag
aacatcacctaccactgcaagaacagcgtggcctacatggaccagcagaccggcaacctc
aagaaggccctgctcctccagggctccaacgagatcgagatcagggccgagggcaacagc
cgcttcacctacagcgtcacctacgacggttgcacgagtcacaccggagcctggggcaag
acagtgatcgaatacaaaaccaccaagacctcccgcttgcccgtcatcgatgtggcacca
ttggacgttggcgccccagaccaggaattcggcatggatattggccctgtctgcttcctg
taa
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