Enhydra lutris kenyoni (northern sea otter): 111152307
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Entry
111152307 CDS
T05871
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16
KO
K12813
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX16 [EC:
5.6.2.6
]
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111152307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
elk03041
]
111152307
Enzymes [BR:
elk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
111152307
Spliceosome [BR:
elk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
111152307
Complex C
U4/U6.U5 tri-SnRNP related factors
111152307
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
Helicase_C
HA2_C
HA2_N
DEAD
AAA_22
AAA_19
AAA_30
nSTAND3
Flavi_DEAD
SecA_DEAD
SRP54
Motif
Other DBs
NCBI-GeneID:
111152307
NCBI-ProteinID:
XP_022366493
UniProt:
A0A2Y9JZL1
LinkDB
All DBs
Position
Unknown
AA seq
1044 aa
AA seq
DB search
MATPAGLERWVQDELHSVLGLSERHVAQFLIGTAQRCASAEEFVQRLRDTDTLDLSGPAR
DFALRLWNKVPRKAVVEKPARVAEREARALLEKNRSYKLLEDSEESSEETVGRAGSSLQK
KRKKRKHLRKKCHEEEEEDEEKISEKGKRKAGGSKQQTEKPESEDEWERTERERLQDLEE
RDAFAERVRQRDKDRTRNVLERSDKKAYEEAQKRLKMAEEDRKAMVPELRKKSRREYLAK
REREKLEDLEAELADEEFLFGDVELSRHEQRELKYKRRVRDLAREYRAAGEQEKLEATNR
YHMPEETRGQPARAVDLVEEESGAPGEEQRRWEEARLGAASLKFGARDAASQEPKYQLVL
EEEETIEFVRATQLQGDEEPSGPPPPTQAQQKESIQAVRRSLPVFPFREELLAAIANHQV
LIIEGETGSGKTTQIPQYLFEEGYTRKGMKIACTQPRRVAAMSVAARVAREMGVKLGNEV
GYSIRFEDCTSERTVLRYMTDGMLLREFLSEPDLASYSVVMVDEAHERTLHTDILFGLIK
DVARFRPELKVLVASATLDTARFSTFFDDAPVFRIPGRRFPVDIFYTKAPEADYLEACVV
SVLQIHVTQPPGDILVFLTGQEEIEAACEMLQDRCRRLGSKIRELLVLPIYANLPSDIQA
RIFQPTPPGARKVVVATNIAETSLTIEGIIYVLDPGFCKQKSYNPRTGMESLTVTPCSKA
SANQRAGRAGRVAAGKCFRLYTAWAYQHELEETTVPEIQRTSLGNVVLLLKSLGIHDLMH
FDFLDPPPYETLLLALEQLYALGALNHLGELTTSGRKMAELPVDPMLSKMILASEKYSCS
EEILTVAAMLSVNNSIFYRPKDKVVHADNARVNFFLPGGDHLVLLNVYTQWAESGYSSQW
CYENFVQFRSMRRARDVREQLEGLLERVEVGLSSCQGDYIRVRKAITAGYFYHTARLTRS
GYRTVKQQQTVFIHPNSSLFDEQPRWLLYHELVLTTKEFMRQVLEIESSWLLEVAPHYYK
AKELEDPHSKKMPKKIGKTREELG
NT seq
3135 nt
NT seq
+upstream
nt +downstream
nt
atggcgacgccggctgggctggaacgctgggtgcaggacgagctgcactcggtgctgggg
ctgagcgagcggcatgtagcgcagttcctaattggtaccgcgcagcgctgcgcctcggcc
gaggagtttgtgcagcgtctgcgagacaccgataccctggacctcagcggaccagcccgg
gacttcgccctgaggctctggaacaaggtaccacggaaggcagtggtagagaagcctgct
cgggtggctgagcgagaggcccgagccctgctggagaagaaccgatcctataaattgctg
gaagacagtgaggagagcagtgaggagactgtaggtagagccgggagcagtctccagaag
aagcgtaaaaaacgaaaacacctcaggaagaaatgtcatgaggaggaagaagaagatgag
gaaaagatttctgagaaagggaagcgaaaggcaggggggagtaaacagcagactgagaag
ccagagtcggaggatgagtgggagcggactgagcgagagcgccttcaggacctggaggaa
cgtgatgccttcgccgagcgggttcggcagcgggacaaggatcgaactcgcaatgtcctg
gagcggtcagacaagaaggcatatgaagaggctcagaagcgcctcaagatggctgaggaa
gaccggaaagccatggtccctgagctgcggaagaaatcccgccgagagtacttggctaag
cgggagcgagagaagcttgaggacctggaggctgagctggctgatgaggagttccttttt
ggggatgtggagctgagccgacatgaacagcgggagctcaaatacaagcggcgagttcgg
gatctggcccgggagtaccgggcggctggggagcaggagaagctggaggccaccaatcgt
taccacatgccagaggagacccgaggccagccagcacgagctgtggatctagtggaggag
gaatcaggcgcccctggagaggagcagcgacgctgggaggaggcccggctgggggcagca
tccctgaagtttggggcccgagatgctgcctcccaggagcccaagtatcagctggtgctg
gaggaagaggagaccatcgagtttgtccgggccactcagctccagggcgacgaggagcca
tcgggcccaccgcccccaacccaggcccagcagaaggaatccatccaggctgtccgccgc
agcctgccagtgttccctttccgcgaggagctcctggctgctattgctaatcatcaggtc
ctcatcatcgagggtgagacgggctccgggaagaccacccagattccacagtatctcttt
gaggagggttatacaaggaagggaatgaagattgcctgcacccagccccggagagtggca
gccatgagtgtggctgcccgggtggcccgggagatgggtgtgaagcttgggaatgaggtt
ggctacagcatccgctttgaggactgcacatcagagcgaactgtcctccgctacatgaca
gatgggatgctcctcagggagttcctctctgaacctgaccttgcaagttacagtgtggtg
atggtagatgaggctcatgaacggaccctacacacagacattctctttgggttaatcaaa
gatgttgctcgcttccggcctgagctgaaggtcttggtggcttcagccacgctggacact
gcccgtttttccaccttctttgatgatgcccctgtcttccgaatccctggacgcaggttt
ccagttgacatcttctataccaaggctccagaggctgactacctggaagcttgtgtagtg
tctgtgctgcagatccatgtgacccagccccctggggatatcctggtgttcctgacagga
caggaggagattgaggctgcctgtgagatgctccaggatcgctgccgccgcctgggctcc
aaaatccgggagctcttggtgttacccatttatgccaacctgccttctgacatacaggct
cgtatcttccagcccacaccccctggggcacgaaaggtggttgtggcaacaaacatcgct
gagacatcactcaccattgaaggcatcatttacgtgctggatccagggttctgtaagcag
aagagctacaaccctcgcacaggcatggaatccctcactgtcacaccctgcagcaaggcc
tcagccaatcaacgggctggtcgggcaggtcgggtggctgctgggaagtgcttccgcctg
tatactgcctgggcctatcagcatgagctggaggaaaccacagtgccggagatccagagg
accagcctgggcaatgtcgtgttgctgctcaagagcttagggatccatgacctaatgcac
tttgatttcctggaccctccaccatatgagaccctcctgctggctttggagcagctgtat
gctctgggagccctcaaccacctcggggagctcaccacgtctggtcggaagatggcagag
ctaccggtggaccccatgctatctaaaatgatcctggcctctgagaagtacagctgttca
gaagagatcctgacggtggctgccatgctgtctgtcaacaactccatcttctaccgaccc
aaagacaaggttgtgcatgccgacaatgcccgtgtcaactttttcctccctggtggagac
cacctggttctgctgaatgtttatacgcagtgggctgagagtggttactcttcccagtgg
tgctatgagaactttgtgcagttcagatcaatgcgccgagcccgggatgtgagggaacag
ctggaggggctcttggaacgcgtggaagttggtctcagctcttgccagggggactatatc
cgtgtacgcaaggccatcacagctggttacttttaccacacggcccggttgactcgtagt
ggctatcgcacagtcaaacagcagcagacagtgttcattcaccccaactcctccctgttt
gatgaacagccacgttggctgctctaccatgaacttgtcttgaccaccaaggagttcatg
agacaggtattggaaattgagagcagttggcttctggaggtggctcctcactattataag
gccaaggaactagaagatccccattctaagaaaatgccaaaaaaaataggcaagacacga
gaagagctagggtaa
DBGET
integrated database retrieval system
