Enhydra lutris kenyoni (northern sea otter): 111161423
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Entry
111161423 CDS
T05871
Name
(RefSeq) transcription elongation factor SPT5 isoform X1
KO
K15172
transcription elongation factor SPT5
Organism
elk
Enhydra lutris kenyoni (northern sea otter)
Pathway
elk03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
elk00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
111161423
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
elk03021
]
111161423
03019 Messenger RNA biogenesis [BR:
elk03019
]
111161423
Transcription machinery [BR:
elk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
111161423
RNA polymerase I system
111161423
Messenger RNA biogenesis [BR:
elk03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
111161423
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
KOW
Spt5-NGN
Spt5_N
DUF3912
DUF150_C
Ribonuc_P_40
Motif
Other DBs
NCBI-GeneID:
111161423
NCBI-ProteinID:
XP_022380758
UniProt:
A0A2Y9LAY9
LinkDB
All DBs
Position
Unknown
AA seq
1087 aa
AA seq
DB search
MSDSEDSNFSEEEDSERSSDGEEAEVEEERRSVAGSEKEEEPEEEEEEEEEEEYDEEEEE
EDDDRPPKKPRHGGFILDEADVDDEYEDEDQWEDGAEDILEKEEIEASNIDNVVLDEDRS
GARRLQNLWRDQREEELGEYYMKKYAKSSVGETVYGGSDELSDDITQQQLLPGVKDPNLW
TVKCKIGEERATAISLMRKFIAYQFTDTPLQIKSVVAPEHVKGYIYVEAYKQTHVKQAIE
GVGNLRLGYWNQQMVPIKEMTDVLKVVKEVANLKPKSWVRLKRGIYKDDIAQVDYVEPSQ
NTISLKMIPRIDYDRIKARMSLKDWFAKRKKFKRPPQRLFDAEKIRSLGGDVASDGDFLI
FEGNRYSRKGFLFKSFAMSAVITEGVKPTLSELEKFEDQPEGIDLEVVTESTGKEREHNF
QPGDNVEVCEGELINLQGKILSVDGNKITIMPKHEDLKDMLEFPAQELRKYFKMGDHVKV
IAGRFEGDTGLIVRVEENFVILFSDLTMHELKVLPRDLQLCSETASGVDVGGQHEWGELV
QLDPQTVGVIVRLERETFQVLNMYGKVVTVRHQAVTRKKDNRFAVALDSEQNNIHVKDIV
KVIDGPHSGREGEIRHLFRSFAFLHCKKLVENGGMFVCKTRHLVLAGGSKPRDVTNFTVG
GFAPMSPRISSPMHPSAGGQRGGFGSPGGGSGGMSRGRGRRDNELIGQTVRISQGPYKGY
IGVVKDATESTARVELHSTCQTISVDRQRLTTVGSRRPGGMTSTYGRTPMYGSQTPMYGS
GSRTPMYGSQTPLQDGSRTPHYGSQTPLHDGSRTPAQSGAWDPNNPNTPSRAEEEYEYAF
DDEPTPSPQAYGGTPNPQTPGYPDPSSPQVNPQYNPQTPGTPAMYNTDQFSPYAAPSPQG
SYQPSPSPQSYHQVAPSPAGYQNTHSPASYHPTPSPMAYQASPSPSPVGYSPMTPGAPSP
GGYNPHTPGSGIEQNSSDWVTTDIQVKVRDTYLDTQVVGQTGVIRSVTGGMCSVYLKDSE
KVVSISSEHLEPITPTKNNKVKVILGEDREATGVLLSIDGEDGIVRMDLDEQLKILNLRF
LGKLLEA
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgtcggacagcgaggacagcaacttctccgaggaggaggatagcgagcgcagcagtgac
ggcgaggaggccgaggtagaggaagagcggcggagtgtagcaggcagtgagaaggaggaa
gagcctgaggaagaagaggaggaggaagaggaggaagaatatgatgaggaagaggaagaa
gaagatgacgaccgacctcccaagaaaccccgccatggtggcttcattctggacgaggct
gatgtggatgatgagtatgaggatgaggaccagtgggaggatggagcagaggacattcta
gagaaagaagagattgaagcctccaatatcgataatgttgtcctggatgaagaccgttct
ggggctcgccgcctacaaaacctctggagggatcagcgagaggaagaactgggagagtat
tacatgaagaaatatgccaagtcgtctgtgggagagacggtgtatggaggatctgacgag
ctctcggatgacatcacccagcaacagctgctcccaggagtcaaggatccaaatctgtgg
actgtcaaatgtaagattggggaggaacgggccacagccatttccttgatgcgcaagttc
attgcctaccagttcacagacacgcccctgcagattaagtcagtggtggcgccggagcac
gtgaagggctacatctacgtggaggcctacaagcagacgcacgtgaagcaggccatcgag
ggtgtgggcaacctgcggctgggctactggaaccagcagatggtgcccatcaaggagatg
acagacgtgctcaaagttgtgaaggaggtggccaacctgaagccaaaatcctgggtccgc
ctcaagaggggcatctataaggacgacattgcccaggtggattatgtggagcccagccaa
aacaccatctccttgaagatgatcccccgcattgactatgaccgcatcaaggcccgcatg
agcttgaaagactggtttgccaaaaggaagaagtttaagcggcctccacagaggctattt
gacgccgagaagatcaggtcccttggcggcgatgttgcctccgacggtgatttcctcatc
ttcgaggggaaccgttacagccggaagggctttctcttcaaaagctttgccatgtctgct
gtgatcacggagggtgtgaagcccacgctctctgagctggagaagtttgaggaccagccg
gagggtattgaccttgaggtcgtgactgagagcacagggaaggagagggagcacaacttc
cagcctggggacaacgtggaggtgtgtgagggtgaactcatcaacctgcagggcaagatt
ctcagcgtggacggcaacaagatcaccatcatgcccaagcacgaggacctcaaggacatg
ctggagttcccagcccaggaacttcggaagtactttaaaatgggggaccacgtgaaggtg
attgctggccgatttgagggtgacacaggtctcattgtgcgagtggaagagaacttcgtc
atcctcttctctgacctcaccatgcatgagctgaaggtgctcccccgggacctgcagctc
tgctcagagacggcatcgggcgtggatgtggggggccagcatgagtggggggaactggtg
cagctggacccccagaccgtgggtgtcatcgtgcgactggagcgggagaccttccaggtg
ctgaacatgtatgggaaggtggtgaccgtcaggcatcaggctgtgacccggaagaaggac
aaccgctttgccgtggccctggactcggaacagaataacattcatgtgaaggacatcgtc
aaggtcattgacggcccccactcaggccgggagggcgaaattcgccatctcttccgcagc
tttgccttcctgcactgcaagaaactggtggagaatgggggcatgtttgtttgcaagacc
cgccaccttgtcctggcagggggctccaagccccgagatgtgaccaacttcacagtgggt
ggctttgcccccatgagccctcggatcagcagtcccatgcaccctagcgctggaggtcag
cgcggtggctttggcagccctggtggtggcagcggaggcatgagcaggggccgggggcgg
agagacaacgagctcatagggcagaccgtgcgcatctcccaggggccctacaaaggctac
attggtgtggtgaaggacgccactgagtccacagcccgcgtggagctgcactccacctgc
cagaccatttctgtggaccgtcagcggctcaccacggtgggctcgcggcgccctggaggc
atgacctccacctacgggcggacacccatgtatggctcccagacgcccatgtacggctct
ggctcccgcacacccatgtatggctctcagacgcctctccaggatggcagccgcaccccg
cattacggttcacagacacccctgcatgatggcagccgtactcctgctcagagtggggcc
tgggaccccaacaatcccaacacgccatcccgggcggaggaagaatatgagtatgccttc
gacgacgagcccaccccatccccacaggcctatgggggcacccccaatccccaaacaccc
ggctatcctgacccctcatccccacaggtcaaccctcagtacaacccacagacgccaggg
acgccagccatgtacaacacagaccagttctccccctatgccgccccctctccgcaaggc
tcctaccagcccagccccagcccccagagctaccaccaggtggcgccaagtccagcaggg
taccagaacacccactctccagccagctaccatcccacaccctcccccatggcctatcag
gccagtcccagcccgagccctgttggctacagtccgatgacacccggagccccttcccct
gggggctacaacccgcacacaccaggctcaggcattgagcagaactccagcgactgggta
accacagacatccaggtgaaggtgcgggacacctacctggatacgcaggtggtggggcag
acaggagtcatccgcagcgtcacaggaggcatgtgctctgtgtacctaaaggacagtgag
aaggtggtcagcatctccagtgagcacttggagcccatcacccccaccaagaacaacaag
gtgaaggtcatcctgggtgaggaccgggaagccacaggagtcctgttgagcatcgatggt
gaggatggcatcgtccgcatggaccttgacgagcagctcaagatcctcaatcttcgcttc
ctggggaagctcctggaggcctga
DBGET
integrated database retrieval system
