Escherichia coli W: WFL_07675
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Entry
WFL_07675 CDS
T02101
Symbol
ydcS
Name
(GenBank) putative spermidine/putrescine transporter subunit
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
ell
Escherichia coli W
Pathway
ell02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ell00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
WFL_07675 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ell02000
]
WFL_07675 (ydcS)
Transporters [BR:
ell02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
WFL_07675 (ydcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Motif
Other DBs
NCBI-ProteinID:
AFH11198
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All DBs
Position
1614278..1615423
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AA seq
381 aa
AA seq
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MSKTFARSSLCALTMTIMTAHAAEPPTNLDKPEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCAVNVKTAATSDEMVSLMTKGGYDLVTASGDASLRLIMGKRVQPINTALIPNWKT
LDPRVVKGDWFNVGGKVYGTPYQWGPNLLMYNTKTFPTPPDSWQVVFVEQNLPDGKSNKG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEEQYQAVLKVLRAQHSLIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANALKAEGQPVATVFPKEGVTGWADTTMLHSEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVPEGCKASPLLGEKGCETNGFNYFDKIAFWKTPIAE
GGKFVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagacatttgcccgcagcagcctgtgtgcgctcaccatgacaataatgaccgct
cacgccgccgaaccacctaccaatttagataaaccggaagggcgactggatattatcgcc
tggccgggatacatcgaacgcggacaaactgataaacaatacgactgggtaacgcaattt
gaaaaagagacaggctgcgcggtgaatgtgaaaaccgccgcgacttccgatgaaatggtc
agtctgatgaccaaagggggttacgatctggttacggcatccggcgatgcctcgctgcgt
ttgattatgggcaaacgcgtgcagccgattaataccgccttgattcccaactggaaaacg
ctcgatccgcgcgtggttaaaggcgactggtttaatgttggcggcaaagtttacggcaca
ccttaccaatgggggccgaacctgctgatgtacaacactaaaaccttcccgacgccgccg
gatagctggcaagtggtttttgttgagcaaaatctgccggacggcaagagcaataaaggc
cgcgttcaggcttatgatggccctatctacattgcggacgctgcgttgttcgttaaagcc
actcagccgcagttgggcatcagcgatccgtatcaactaaccgaagaacagtaccaggcg
gtgctgaaagtgctgcgcgctcaacacagtttgatccatcgctactggcatgacactacc
gtgcaaatgagcgatttcaaaaacgagggtgtggttgcttccagtgcctggccctatcag
gccaacgccctgaaagccgaaggccagcctgttgctaccgttttcccgaaggagggtgtt
accggttgggctgataccaccatgctgcatagcgaagcgaaacatccggtttgcgcctac
aaatggatgaactggtcattaacgccaaaagtgcagggcgatgtggcggcctggtttggc
tcgttaccggtagtgccggaagggtgtaaagccagtccgttattaggcgaaaaaggttgt
gaaaccaacggttttaactatttcgacaaaatcgccttctggaaaacgcctatagcagaa
gggggcaagtttgttccctacagtcgctggacgcaggattacattgccattatgggcggt
cgctaa
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