Escherichia coli O83 H1 NRG 857C (AIEC): NRG857_09185
Help
Entry
NRG857_09185 CDS
T02068
Symbol
yebU
Name
(GenBank) rRNA (cytosine-C(5)-)-methyltransferase RsmF
KO
K11392
16S rRNA (cytosine1407-C5)-methyltransferase [EC:
2.1.1.178
]
Organism
eln
Escherichia coli O83:H1 NRG 857C (AIEC)
Brite
KEGG Orthology (KO) [BR:
eln00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eln03009
]
NRG857_09185 (yebU)
Enzymes [BR:
eln01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.178 16S rRNA (cytosine1407-C5)-methyltransferase
NRG857_09185 (yebU)
Ribosome biogenesis [BR:
eln03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
NRG857_09185 (yebU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
YebU_pre-PUA_dom
Methyltr_RsmF_N
Methyltranf_PUA
Methyltransf_31
PCMT
Methyltransf_25
TRM
TruB-C_2
FtsJ
Ubie_methyltran
Motif
Other DBs
NCBI-ProteinID:
ADR27260
UniProt:
A0A0H3EI06
LinkDB
All DBs
Position
1891959..1893404
Genome browser
AA seq
481 aa
AA seq
DB search
MLVAQHTVYFPDAFLTQMREAMPSTLSFDDFLAACQRPLRRSIRVNTLKTSVTDFLQLTA
PYGWTLTPIPWCEEGFWIERDNEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAP
QRVMDVAAAPGSKTTQIAARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGR
VFGAAVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQEIAATQRELIDSAFHALRP
GGTLVYSTCTLNREENEAVCLWLKETYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIY
DCEGFFVARLRKTQAIPALPTPKYKVGNFPFSPVKDREAGQIRQAAASVGLNWDENLRLW
QRDKELWLFPVGIEALIGKVRFSRLGIKLAETHNKGYRWQHEAVIALASPDNVNAFELTP
QEAEEWYRGRDVYPQAAPVADDVLVTFQHQPIGLAKRIGSRLKNSYPRELVRDGKLFTGN
A
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgctcgtggcccaacacaccgtttatttcccggacgcctttctgacacaaatgcgcgaa
gcgatgccttcgacgctctcttttgatgattttcttgccgcctgtcagcgcccgttgcgc
cgcagcattcgcgttaatacgctgaaaacctccgttactgatttcctgcaattaactgct
ccttatggctggacgcttacgccaattccgtggtgtgaagaaggtttctggattgaacgc
gacaatgaagatgcattgccgttgggtagtaccgccgagcatttaagcggcctgttttat
attcaggaagccagttcaatgttgcctgttgccgccttgtttgctgacggtaatgcacca
cagcgggtgatggatgtcgctgctgcaccaggttccaaaacgacgcaaattgctgcgcgg
atgaataacgaaggggcaatccttgccaatgagttttccgccagtcgggtaaaagtgtta
catgccaatatcagccgctgtggcatcagtaatgttgcgctcacgcattttgatggccgc
gtatttggtgcggcagtgccagaaatgttcgatgccattttgctggacgctccctgctcc
ggcgaaggcgtggtgcgtaaagatcccgatgcgctaaaaaactggtcaccagaaagcaat
caggaaatcgcagcgacccaacgggaactgatcgacagcgcctttcatgcattacgtcct
ggcggtacgctggtttactcgacctgtaccttaaaccgggaagaaaacgaagccgtttgc
ctgtggctgaaagagacttatcccgacgcagtagagtttttaccgcttggcgatctcttc
cctggtgcaaacaaggcgctgaccgaggaaggctttttgcatgttttcccacaaatttac
gactgcgaaggcttcttcgttgctcgtctgcgtaaaactcaggcgattcccgccttaccc
accccaaaatacaaagtgggcaatttcccgttcagcccggtgaaagatcgcgaagccggt
caaattcgtcaggcggctgcaagtgttggcttaaactgggatgaaaacctgcgactctgg
cagcgtgacaaagaactgtggttgttcccggtaggcattgaagccctgatcggtaaagtc
cgattttctcgcctggggattaaacttgccgaaacgcacaacaaaggttatcgctggcag
catgaagccgttattgcccttgcctcccccgacaatgtgaacgcttttgaactgacaccg
caggaagcggaagagtggtatcgcgggcgcgatgtttacccgcaagccgcgccagtggcg
gatgatgtattggttaccttccagcatcagccgattggtttagccaaacggattggttca
cgactgaaaaacagctacccgcgtgaactggtgcgcgacgggaaactttttaccggtaac
gcctga
DBGET
integrated database retrieval system
