Esox lucius (northern pike): 105006047
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Entry
105006047 CDS
T04894
Name
(RefSeq) nucleoprotein TPR isoform X1
KO
K09291
nucleoprotein TPR
Organism
els
Esox lucius (northern pike)
Pathway
els03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
105006047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
els03019
]
105006047
Messenger RNA biogenesis [BR:
els03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
105006047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_MLP1_2
GAS
End_tail_spike
Motif
Other DBs
NCBI-GeneID:
105006047
NCBI-ProteinID:
XP_012988239
LinkDB
All DBs
Position
LG03:36660360..36820892
Genome browser
AA seq
2429 aa
AA seq
DB search
MAAVLLQILERTELNKLPKPAQNKLEKFLTDQQNEIEFLKAQHERFKADCEQQHFDIERR
LAESLEQVLTHTRDYQILKDENNKLIDELNNVKGVDVELSDEKESEQLNKAKYEIEAERR
ELARLLEKRTQEVETLTEDVKRLNDKYLETNAAKLDLKLKLDEIQSSEFSIQHREKRMEQ
EKELVQNHNAWLGSELKAKTEELLSISREKGKEVLELKCCLEGRKDEVTQLQTQVTNLKM
ISENLEKQVEDLMTKLKEAKDQQSTMVEKYNNELNAQIKLGNLYKAAASDAESKNDELNR
AVQELQTLTKEAGDARQTLEKKLTDMEDSNAKRETELKEMINKLEMELENANLLASNKSA
NMPVLTEEELDSMCPTAAAVAKIVKPGMKFMELYNAFVDVQGQLLVEKQENRRVTQILDE
IVQEVEEKAPILKRQREEYENVQRSMSSLCVKLEQARMEIHSLQKEADDAKKHCSSLEVD
SERSRRQLEDMSLQVRVLLVELEEVRGNPIVHDETANVSSSSEVVRLRQVRFRSVDELQR
QNQSMLVRLRELEEQREREQTEAKSACVTQLEQQLDNVQQELEIIKEQRNQQKQLADSNA
RQRDMYRILLSQSTGLDFPPQGPPRDVTPHTYTPSRPSFPPPTRSTPMRAATSESAQNTQ
AKAALKQLNDSFTMYKKEKAENDKLLNEQNDKLQEQLSEVRCQKAKLSTQLEFATKRYEM
LQENVNGNRREIAVLQEKNEKMSATAQKHEQIVHTMTQDLRAANEKLAMAEVRLENLKKE
RDMLKSAEFRQNQEKEAMIAEQRNQNLLLTNLKSIQLMMERTDTETRQRLNRQIERLERE
LTQFKNKLAEEVEQRHMLGRNQDAQLLEAKKQLEAQCALHQKTKELLMNAEQQASLLRQQ
LSQTETQNPGTGQGLSLDQTNPRAPIRVPLRSPVTVLSQTPAQSQAPQQDKLQAELEEVY
GRLQKSDKQISDLQELLQNASTNVEQYRTVVLSLEESLSKEKQARLPLETRLKEAHEFRH
GLEKKLVESEKEKQELREENRKAVEIVEKEGNELKRTMKNMQSELQEALERMAAAMTKER
MAIQDSSQQAKLALEAQNKYERELMLHAADVEALQAAKKQALQGNQSRKQLEDKANQVTA
QLQEARSNWNQLEKKLKEDLSKLQKRADELQKQNDLLHQQIESLGTKMASTVQWHHQQAS
RENSLNLYFSEEGKSREQILEILRFVRREKEIAETQFEVAQVETLRYKQQAEHQDRELKE
LHESLNAEREKLQLTAKTIAQNDEKLKKMENMNVLVETNKMLKEERERLEQELHQTQAKV
QKLENDITPLQDSYSELSKKNDMLQAEKKLLEEDIKRWKTRTQQLVSQQKDTDQEENKKL
ISEREAHLKRIHQLSEETGRLKAEVARTQASLTTAQSQLQNVRETLGKVTTERDTTKKEL
DVKNIDIQEKAKTITQVKKIGRRYKTQYEELKVQNDKLVAEAAAKEVQQAQQHAQQLAQQ
ASAQEIQCLKNSLTQANTKIKDLEGQLENVQKTVIERDSEMGRLEQEVIRLQGQSTQALG
TQGEVTRLKQELQMKANQEETLRLQLADKEEKTKKAFMGAKQKINQLNIAKEKLTKEVKE
LKQQREEQEVRLSALKSQYEGRLHRQDREIRELRDHRDEQPQRDELQDQGNNKEQPQRAP
EQRQITQRTTQATDRGSGSSGSSEQPPTANIKPTPVTGGSTGKPSQIPGNKSTPRASIRP
MVPVTVPTPTATVMPTTQSDNQEVLQTSEGGISVEHVSVFGSTSGSVRSTSPNVQNTAHS
QSISSQATAFVQPTQQQQAPSTSEPANQEPEAGTGGQMERPSTSTAVFCSGMAIVGSTGP
KRAREDEQEAASDSTDMVQEESEEQPIPKKLCIIQRVGLEEDCEEGTDGDAEVSGVNQET
PDGNQELPDVSFPIYREVEEEEEDGVSQSVPSDHQVTLRTSNMQDSIEERQPDVIVIDTD
SSNRDEEEEAEQYEEEDEVNEDDDPGMGGEESNEGSRDAIEPFEGEGDERGLETSEPASD
NESMGATDSTSQKQADSQSGEGSSSTTESIPFPLADPPRELLQSTPNTATTFSTSPSPFP
SSLSLDPRQVPLRLPQSVPRRPPHPLPPRLYIQPPAPELGFGPPPTQRQPAPIRRQSVGR
GPQLTPGIGSMQHFFDEDDRMVPSTPTLVVPHRTDGFAEAIHSPQVAGVPRFRFGPPEDM
PQASSSHSDLGQLASQGGTAHTSSAQFLDGLGMYESPLFLAAHDEESGGRSVPTTPLQVA
APVTVFTESHPSDMHDMASQSVPMVTTSAGHQGLVVSGGEAAPVDDGDEVFLEAENEGNS
GDTVMESQAEMDSSQPSDDASLPSTSQEPNSSSGDTSSSVQPKPSGRPIPQHSLAMRATN
RGRTLIRRGKSSCFTRAGRGPFSRGNLPR
NT seq
7290 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagttctgttacagattttggagcgtacagagctgaacaaactccccaaaccg
gctcaaaacaaacttgaaaagttccttactgaccagcagaatgaaattgaattcctcaaa
gcgcagcatgagcggttcaaagcagactgtgagcagcaacactttgacattgaaaggagg
ctggccgagagtctggagcaggttctgacgcacaccagagattaccagattctcaaagat
gagaacaacaaactcattgatgagctgaacaatgtgaaaggtgttgatgtggaattgtcg
gatgagaaggaatctgagcagttgaacaaagccaaatatgagattgaggccgaaaggcgg
gaactggcccgtcttcttgaaaagcgaacacaagaagtcgagactctaactgaggatgtc
aagaggctcaatgacaaatatttggagaccaatgcagccaagttggatcttaagcttaaa
ctggatgagatccaatcttcagagttttccattcagcaccgagagaaacgtatggaacag
gagaaggagctggttcagaaccacaacgcatggctgggctccgaactgaaggccaagact
gaggagcttttgtcaatctccagggagaagggcaaggaggtcctggagctcaagtgttgt
ctggagggcaggaaggatgaggtcacacagcttcaaacacaggtcaccaacttgaagatg
atcagtgaaaacttggagaagcaggtggaggacctgatgaccaaactgaaagaggccaaa
gaccaacagagcaccatggtggaaaagtacaacaatgaactaaatgctcaaatcaagctc
ggcaacctgtacaaggcggccgcttcagatgcagagtccaagaacgacgagcttaacagg
gctgtacaggagctgcaaacgctgacaaaggaggctggagatgcaaggcagaccttagag
aagaagctgacggacatggaggattcaaatgccaaacgggagactgagctgaaggagatg
atcaacaaattggaaatggagctggagaatgccaatctgctggcttcaaataagagtgca
aacatgccagttcttacagaggaggagttggactccatgtgtcctactgcagctgctgtt
gccaagattgtcaagcctggaatgaaattcatggagctgtacaacgcatttgtggatgtc
cagggccagttgcttgtggagaagcaggagaaccggcgtgtgacacagatattggatgag
attgtccaagaggtggaagagaaggcacctattctgaagcgccagcgggaggaatatgag
aatgtacagaggtccatgagcagcctctgtgtcaagctggaacaggccaggatggagatc
cacagccttcagaaggaggcagatgatgccaaaaaacactgctctagcctggaggtggat
agtgagcggtctaggagacagttagaggacatgtccctgcaggtgcgtgtgctgctggtg
gagctggaggaagtacggggcaatcctattgtccacgatgagactgccaatgtgagcagc
agctctgaggttgtcagacttcgccaggttcgtttccgcagtgtggatgagctgcagagg
cagaatcagagtatgctggtgcgcctccgggagctggaggaacagagggagagagagcag
actgaggccaagtctgcatgtgttacccagctggagcagcagctggacaatgtccagcag
gagctggagattattaaagaacagaggaaccagcagaagcagttggctgactccaacgcc
cggcagagagacatgtatcgaattctgctgtcccagagcactggcttagacttcccaccc
caaggtcctccacgggatgtcactccccacacctacacccccagccggccctctttcccc
cctcctaccaggtcaacacctatgagagctgcaacatctgagtctgcccagaatacccaa
gcaaaggctgccctcaaacagttgaacgactctttcaccatgtacaagaaggagaaggca
gagaatgacaagttgctgaatgagcagaatgacaagctgcaggagcagctatctgaggtc
cggtgccagaaagccaagctctccacacaacttgagtttgcaaccaagaggtatgagatg
ctgcaggagaatgtgaatggcaacaggcgggagattgctgtgttgcaagagaagaacgag
aaaatgtccgccactgctcagaaacatgagcagatcgtccacacaatgacacaggacctc
cgggcagcaaatgagaaactggcgatggcagaggtacgtcttgagaacctgaagaaggag
agggacatgctgaagtcagctgaattcaggcaaaatcaagagaaggaggccatgatagct
gagcagcgcaaccagaacctactcctcaccaacctcaagtctattcagctaatgatggag
cggacagacactgagaccaggcagcgtctaaaccgacagatagagagactggagagggag
ctcacccaattcaagaataaattggctgaggaggtggagcagagacacatgctaggccgc
aatcaagatgctcaactgctagaagccaagaagcagctagaggcccagtgtgccctacac
cagaagaccaaggagctgttgatgaatgctgaacaacaggccagtctactgagacagcag
ctcagtcagactgagactcagaacccgggtacaggtcaaggtctgagcctggatcagacc
aacccaagggctcccatcagagttccactcagatctccagtgactgttctgtcccagacc
ccagcccagtcccaggcaccacagcaggacaagctgcaagcagaattagaggaagtgtat
gggcgtctgcagaagtctgataagcagatcagtgacttgcaggagctcctgcagaatgcc
agcaccaatgtagagcagtaccgcactgtagtgctcagcctggaagagtctcttagcaag
gagaaacaggctcgattgcctctggagactcgtttgaaggaggcccatgagtttcggcat
gggctagagaaaaagctggtggaatctgagaaggagaaacaggagctccgtgaggaaaac
aggaaagctgtggagattgttgagaaagagggaaatgagctgaagaggaccatgaagaac
atgcagtcagagctccaagaggccctggagaggatggctgcagccatgaccaaggaacgg
atggccatccaagatagttcacaacaggccaagctggccttggaggcccagaacaaatat
gagcgggagctgatgcttcatgcggctgatgtagaggctctgcaggcagccaagaaacag
gcccttcaggggaaccagagcagaaagcagttagaggacaaggcaaatcaagtaaccgct
cagttacaagaggcccgctccaactggaaccagctggagaagaaactcaaggaagatctt
tcaaagctgcagaagcgagcagatgagctgcagaagcagaacgacctgctgcaccagcag
atagaaagtttaggaaccaagatggcctccacagtgcagtggcaccaccaacaagccagc
cgggaaaacagcctcaacctgtacttcagcgaggagggcaagagtcgggaacagatcctt
gagatccttaggtttgtgcgacgtgagaaagaaatagcagaaacgcagtttgaggtggct
caggtagagacactacgctacaaacaacaggctgaacaccaggatagagaattgaaggaa
ctgcatgagagcctcaatgcagagagagaaaaactgcagctaacagcaaagacaatagcc
cagaatgatgagaagttgaagaagatggagaacatgaacgtacttgtggagaccaacaag
atgctgaaggaggagcgagagagactggagcaggagctgcatcagacacaggccaaagtg
caaaagctagagaatgatatcactcccctgcaggactcctactccgaactgagcaagaag
aatgacatgctgcaggctgaaaagaagctgctggaggaggatatcaaacgctggaagacc
cgcacacagcaactggtgagccagcagaaggacactgaccaggaggagaacaagaagcta
atctctgagcgggaggcccatctcaaacgtatccatcagctctctgaggagactggtaga
cttaaggctgaggtcgccaggacccaagcttcattaaccacagcccaaagccagttgcag
aacgttagagagaccctgggcaaggtgaccaccgagagggacactaccaagaaagaactt
gatgtaaagaatattgacatccaggagaaggccaaaaccatcacgcaggtcaagaagatt
ggacgacgctacaagacccaatacgaggaactcaaagtacagaatgacaagcttgtggca
gaagctgcagccaaggaggtgcagcaggcccagcagcacgcccagcagctggctcagcag
gcctcggcccaggagatccagtgtctgaaaaactccctcacccaggccaacaccaagatc
aaagaccttgagggtcaactagagaatgtacaaaagacggtgattgagcgtgacagtgag
atggggcgtctggaacaggaggttatccgtctccaggggcagtctacccaggccttgggg
acccagggagaggtaacaaggcttaaacaggagctacagatgaaggctaaccaggaggag
acgctaagactacagctggcagacaaggaggagaagaccaaaaaggctttcatgggagcc
aagcaaaagatcaaccagcttaacattgcgaaggagaagctgactaaggaggtgaaggaa
ctgaagcagcagcgggaggagcaagaggtgcgtcttagtgccctgaagtcccagtatgag
ggccgtttgcaccgacaggacagagagatcagggagcttagagaccaccgtgacgaacaa
cctcagagggatgagctccaggaccaaggcaacaataaggagcaaccacaaagagctcct
gagcaaaggcagatcacccagaggaccacccaagctacggacaggggaagtggttcttcc
ggctcctcagagcagccccccacagccaacatcaagcctacccccgtgacaggtggttcc
actggtaaaccctcccagatccccggaaataagtccaccccgagggccagcatccgacca
atggtgcccgtgactgtacccactcccactgccaccgtcatgcccaccacacagtctgac
aaccaggaagtgcttcagacctctgagggtggaatctccgtggaacatgtgtctgtgttt
ggcagcaccagtggctcagtccgctccaccagccccaacgtccagaacaccgcacactct
cagtcaattagcagccaagccactgcttttgttcagcccacccagcaacagcaggcccca
tccacctctgagcctgcaaaccaggaaccagaggctggtactggcggtcagatggagagg
ccttcaacatctacagcagtgttttgctcaggtatggccatagtaggctctacggggcct
aagcgtgcccgtgaggacgagcaggaggctgcgtccgatagcaccgacatggtccaggag
gagagtgaagaacaaccaatccctaagaagctctgtatcatccagagagtgggcctggag
gaagattgtgaagagggcacagatggagatgctgaagtatcaggagtgaaccaagagact
ccagatggcaaccaggagctaccagatgtgtcattccctatatatagagaggtggaggag
gaggaagaggacggggtatcccagtcggtcccctcagaccatcaggtgactctccggact
tctaatatgcaggactccattgaggaacgccagcctgacgtcattgtcattgacacagac
agctccaatcgagacgaagaggaagaggcagagcagtatgaggaagaggatgaagtcaat
gaagatgacgacccggggatgggaggagaggaaagcaacgaggggagtagagatgccatc
gagccatttgaaggagagggggacgagagaggtctggagacttcagagcctgcctcagac
aatgagagcatgggagctacagactccacctcccaaaaacaagctgactctcaaagtggt
gaagggagcagcagcactacggagtccattccttttcccttggctgacccccccagagag
ctgttacagtcaacacctaacaccgccactaccttttctacatccccctctccattccca
tcctcactcagccttgatccacgccaagtccctctgcgcctgccccagtctgttccccgc
cgcccccctcatcccctccccccacgtctctacatccagccccccgcccctgagctgggc
tttggacccccacccacacagaggcagcctgcaccaatccgccgacagtctgtaggcaga
ggaccacagctcactcctgggataggcagcatgcaacatttctttgatgaggatgacaga
atggtccccagcacccccacactggtggtcccccaccggactgatggctttgctgaagcc
atccattctccccaggtggcaggagttcccaggttcaggtttggtcctcctgaagatatg
cctcaagccagctcctcccattctgacctgggccagcttgcctcacaaggaggtacagca
cacacatccagtgctcagttcttagatggtctggggatgtatgagagtcctctgtttctg
gctgctcatgatgaagagtcaggagggaggagtgtccccaccacacccttacaggtcgct
gccccagtgacagtctttacagagtcacacccctcagacatgcacgacatggcatcgcag
tccgttcctatggtgaccacatctgcaggtcaccaggggctggtggtgtctggtggagag
gcggcccctgtagatgatggagacgaagtgttcttggaggcagagaatgaaggtaacagt
ggtgatacggtgatggagagccaggctgaaatggactcttcccagccatccgacgatgcc
agcctgccctccaccagccaggagcccaattccagctctggtgacaccagtagtagtgtg
cagcccaagccgtcaggccgtcccatacctcaacattctctggccatgagggcaaccaac
agaggcagaactcttatacgaagaggtaagtcttcatgcttcactcgagcaggaagaggt
cccttcagtagaggaaacctaccccgctaa
DBGET
integrated database retrieval system