Esox lucius (northern pike): 105007403
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Entry
105007403 CDS
T04894
Symbol
trim55
Name
(RefSeq) tripartite motif-containing protein 55 isoform X1
KO
K10654
tripartite motif-containing protein 55
Organism
els
Esox lucius (northern pike)
Pathway
els04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
105007403 (trim55)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
els04121
]
105007403 (trim55)
Ubiquitin system [BR:
els04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
105007403 (trim55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
zf-B_box
zf-RING_2
zf-RING_5
zf-C3HC4_3
zf-RING_6
zf-C3HC4_4
Sina_RING
Motif
Other DBs
NCBI-GeneID:
105007403
NCBI-ProteinID:
XP_010864625
UniProt:
A0A3P8XXF6
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Position
LG03:complement(30685732..30696773)
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AA seq
532 aa
AA seq
DB search
MSISLGYSHSRNQDSTMDGLEKQLICPICLEMFTKPVVILPCQHNLCRKCAQDIFQASNP
YLSTRGTTVTSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDMYKQEQESSSTKPEP
EPAKCVQPMCEEHEGEKINIYCVTCGLPTCSLCKVFGIHKDCDVAPLHTVFNKQKMELTD
CISMLVGNNDRIQGIMSQLDETCKIIEENGRRQKSKVCECFDHLYAVLEERKGDMTLKIN
AEQQEKLDYINGLTRKYREHLENMAKIVETGIQTMEESEMATFLQTAKPLLQKLIAGTNI
SHLDKVERGYENMDHYTANFERERRALLSIDFVKDDEDDEEFEDEEEEVEVMGVTGASHT
DVFPAAVGPSIVGANSPKPQQVTPAPTQPTAPPPLPQRPPETLGATATLPTPQASTRATT
PVQFPSLTPNPTATAQVRATTPVHFPSATPVLFPNTTPVQFPNPTPVQFPNTTPVQFPNT
TPVQFPNTTPVQFPSAEPPAQMSSDTASGQPNTDDKDGPKHVFSFSWLNNQK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgagtatctctttagggtattcacattccagaaatcaagacagtaccatggacggcttg
gagaaacagctcatttgcccaatttgtttggagatgtttaccaaaccagtggtcattctc
ccttgtcaacacaacttgtgtcgaaagtgtgcccaagatattttccaggcctcaaaccct
tatctatcaaccagaggaaccacagtgacttcaggagggcgttttcgctgcccttcctgc
agacatgaggtggtcctggacaggcatggtgtttatggcctgcagaggaatctgctggtg
gagaatatcattgatatgtacaaacaggaacaggaatcctcaagtaccaagcctgagccg
gagcccgccaagtgtgttcaacccatgtgtgaagagcacgagggtgagaagatcaacatc
tactgcgtgacgtgtggcctccccacctgctccctctgcaaggtgtttggtatccataaa
gactgtgatgtggcccctctccacactgtgttcaataagcaaaagatggagttgactgat
tgtatatccatgctagtgggaaacaacgacaggattcagggcatcatgagtcagcttgat
gagacctgtaagatcattgaggaaaatggcaggaggcagaaatccaaggtgtgtgaatgt
ttcgatcacctttatgccgtcctggaggaacggaaaggtgacatgaccctaaagatcaat
gcagagcaacaggagaaactggattatatcaacggccttaccagaaagtatagagaacac
ctggagaacatggccaagatcgtggagacaggcatacagacaatggaggagtccgagatg
gctactttcctgcagactgcaaagcctcttctgcaaaagctcattgcaggcaccaacatt
tctcacctggacaaagtggagcgtggctacgagaacatggatcactacacagccaacttt
gagcgggaaaggagggcattgctctcaatagattttgtaaaagatgacgaagatgatgaa
gaatttgaagatgaagaagaggaagtcgaggtgatgggggtgacaggagcgtcccataca
gatgttttccctgctgctgtagggccctccattgttggggccaactctcccaagccccag
caggtgaccccagcacctacccagccgacagcacccccacccctgcctcagagaccacct
gagacccttggcgccactgctaccctgcccacaccacaggcctccacccgtgccacaacc
ccagtacaattcccatccctaaccccaaacccaactgccaccgcacaggtccgtgccaca
accccggtccatttcccttctgcaacaccagtcctgttcccaaacacaacaccggtccag
ttcccgaacccaactccagttcagttcccgaacacaacccctgttcagttcccaaataca
acccctgttcaattcccaaacacaaccccggttcagtttccttcagcagagccaccggca
cagatgtcttctgatacagcatcaggtcagccaaacacagatgacaaagatggacccaaa
cacgtcttctccttttcttggctgaacaaccagaagtag
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