Esox lucius (northern pike): 105007484
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Entry
105007484 CDS
T04894
Symbol
col8a1
Name
(RefSeq) collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
els
Esox lucius (northern pike)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
105007484
NCBI-ProteinID:
XP_010864741
UniProt:
A0A3P9AEW6
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Position
LG16:complement(721706..738890)
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AA seq
753 aa
AA seq
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MATPTLSIPLPLLAALLQLAVLPLVHSGAFYGHKQPPQPMPHLPHMGGKEQHMQQQWPVK
EMPHIQYPPYRKEIPQIPMHMGKNYPRKGGLVSGGHDKGQIVSGAAAGEVPGGLPGGLPG
QQGPAGPPGPQGPPGPPGPPGKGQPGVEGKPGPAGPPGLPGVGKPGLPGIPGKPGGMGEP
GAPGELGPSGGEGPMGQPGTQGPPGPPGLPGIGKQGAGGLPGQPGSRGDPGHKGLPGLPG
LPGPKGDKGIGPPGQPGHKGLPGHPGPPGQGGLPGIGKPGINGMPGPQGAPGKPGPPGEQ
GLTGPAGDGGQPGPPGLPGQGKPGQNGLPGQPGIPGGKGHPGPPGLPGKPGLPGLGKPGM
PGPKGDKGMGGMPGALGPKGDKGHGGLPGVLGPPGPIGPAGPPGLMGPPGGLGQLGPKGD
SGEVGHKGQPGGQGVAGAPGLPGPNGLPGEAGQPGLRGLPGPVGPQGEGGHKGLPGSPGI
PGLPGPKGEVGLPGEKGPQGPKGIPGLGGAGGPIGPPGAPGPKGDNGSPGLPGIEGVGIP
GVPGPLGPPGKEGPGGQPGNPGQPGPPGPPGPPGAPALTPDLGAVLPEMGLPPGLDGVKA
AGYGKKGKYGGNGGEGMGASGLEMPAFTALVTTPFPPVGTPVVFDKVLYNGRQNYNPQTG
VFICDMPGIYYFAYHIHCKGANVWVALMRNDEPVMYTYDEYKKGFLDQASGSAVLPLQPG
DSVYLQLPSDQAAGLYAGQYVHSSFSGYLLYPM
NT seq
2262 nt
NT seq
+upstream
nt +downstream
nt
atggccacgcccacactctccattccccttcctctcctggcggctctgctgcaacttgca
gtactgcctcttgtccactcgggggcattctacggacacaaacagcccccccagcccatg
ccacacctcccccatatggggggtaaggagcaacacatgcagcagcagtggccagtcaag
gagatgccccacatacaataccccccgtacaggaaagagattccgcagatccctatgcac
atgggcaagaattaccctcgcaaaggaggactggtcagtggtggacatgacaaaggccag
attgtttctggagctgctgcgggagaggtccctggaggacttcctggtggtctacccgga
cagcagggccctgctgggcctcccggaccccagggaccacctgggccaccaggaccaccg
gggaaaggacagccaggagttgaagggaaaccagggccagctggtccaccgggactccct
ggagtaggcaaaccaggactcccaggaattcctggcaagccaggcggcatgggagagcca
ggagctcctggagagctgggtcctagcggcggagagggtccaatggggcagccagggact
cagggccctccgggacctccaggcctgccagggataggaaaacaaggtgctgggggtttg
ccaggacaaccaggatccagaggagacccaggacacaagggcttgccaggattaccagga
ttaccaggaccaaagggtgacaaaggaattggaccaccaggacagcctggccacaaaggg
ctaccaggacaccctggacctccaggccagggggggttgcctggcataggcaaaccagga
attaatggcatgcctgggccacaaggagcaccagggaaaccagggccaccaggagagcag
ggactgacaggaccagcaggagatggtggacagcccggtcctccgggcctacctgggcaa
ggaaaaccaggccagaatggtctaccgggacaaccaggcattcctggtgggaaagggcac
ccgggccctccaggtttgccagggaagcctggattacctggattaggaaaaccaggaatg
ccaggtcccaagggagataagggaatgggtggaatgcctggagccctgggaccaaaggga
gacaaaggccatggaggactgccgggagtgctagggccacctggaccaatcggacccgct
ggtccccctggccttatgggccccccgggaggtctgggccaactagggcctaaaggagac
tctggagaggtcggacataaggggcaaccaggtggccaaggtgtggctggtgcacctgga
ctgcctggtccgaatggcttaccaggggaggccggacagccagggttacggggtctccct
gggcctgtgggaccccaaggagaaggaggacacaaagggttacctgggtcccctggcatt
ccaggcctgcctgggccaaaaggggaggtcggacttcctggcgagaagggtccccaaggt
ccaaaaggaattccgggtctgggaggtgctggtggaccaattggacctcctggggcacct
ggtcctaaaggtgacaatggatcccctggtcttccaggcattgaaggtgtgggaatccca
ggtgttcctggccctcttggacctccaggtaaagaaggtccgggtggacaaccgggaaac
ccaggccaaccaggcccacctggtcccccgggccctcccggagcccctgccttgacacct
gacttgggagcagtcctccctgagatgggccttcctcctggcctagacggagtcaaagcc
gccggatacggcaagaaaggcaaatacggagggaatggtggtgaggggatgggtgctagt
gggctggaaatgccagcgttcacagctctggtgaccacgcccttcccgcctgtaggcacg
cccgtggtgttcgacaaggtcctgtacaacggccgtcagaactacaacccccagacgggc
gtgttcatctgcgacatgcccgggatctactactttgcttaccacatccactgcaagggt
gccaacgtgtgggtggcactgatgaggaacgatgagcctgtgatgtacacttatgatgag
tataagaagggcttcctggaccaggcgtcgggtagcgcggtgttaccgctgcagcccggg
gactcggtgtacctccagctgccttctgaccaggcggccgggctgtacgcgggccagtac
gtccactcctccttttctgggtacttgttgtaccccatgtaa
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