Esox lucius (northern pike): 105009444
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Entry
105009444 CDS
T04894
Name
(RefSeq) retinoic acid receptor RXR-gamma-B isoform X1
KO
K08526
retinoid X receptor gamma
Organism
els
Esox lucius (northern pike)
Pathway
els03320
PPAR signaling pathway
els04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
els00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
105009444
03320 PPAR signaling pathway
105009444
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
els03000
]
105009444
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
els03310
]
105009444
Transcription factors [BR:
els03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
105009444
Nuclear receptors [BR:
els03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
105009444
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Nuc_recep-AF1
Hormone_recep
zf-C4
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
105009444
NCBI-ProteinID:
XP_012990600
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Position
LG08:34209186..34264058
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AA seq
460 aa
AA seq
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MDSRHNDPYLHLNSPGSMSTTHSHGPPMSGMVGHPSVISTSRPLPSPMRTLGSPMNGLAS
PYSVITSSMGSPSVQLPSTPALNFGSLHSPQMREMNSMNSVSSSEDIKPPPGLQNLGSIN
YNCTSPGGMSKHICAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDSKECLIDK
RQRNRCQYCRYQKCLAMGMKREGVSVQEERQRGKERGENEVESTSSFNEEMPVDKILDAE
LAVEPKTETYADEGPGNSKNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLR
AGWNELLIASFSHRSVTVKDGILLATGLHVHRSSAHSAGVGSIFDRVLTELVSKMKDMKM
DKTELGCLRAIVLFNPDAKGLSNPPEVEGLREKVYASLESYTKAKYPDQPGRFAKLLLRL
PALRSIGLKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQIT
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atggacagtaggcataatgatccttatttacacctcaactccccagggtcaatgagcaca
acccactcacatggccccccaatgagcggtatggtgggacacccctctgtcatcagcacc
tctaggccccttccatccccaatgagaactctgggctccccaatgaatggcctagcctca
ccctactccgtcatcacatcctccatgggctcgccgtccgtccagctgccctccacgcct
gcactcaactttggatcgctccatagtccacagatgagagagatgaacagtatgaacagt
gtcagtagttccgaggacatcaagcctcctccaggtctccagaatcttggaagcatcaac
tacaactgcaccagccccgggggaatgtccaaacacatctgtgccatctgcggagaccgg
tcctcagggaagcactatggcgtgtacagttgcgaaggctgcaaagggtttttcaaaaga
accatccggaaagacctcacctatacatgtcgagacagcaaggagtgcctgattgacaaa
cgacagcgaaaccgctgtcagtactgccgctaccagaagtgcctggccatgggcatgaag
agagaaggtgtgtcggtgcaggaggagaggcagcgggggaaggagcggggggagaacgag
gtggagtccaccagtagttttaatgaggagatgcctgtcgataagattctggatgcagag
ctcgctgtggagcccaaaacggagacatatgcagacgaaggccccggcaattcaaagaat
gacccggttaccaacatctgccaggcagcagacaaacagctgttcaccctggtggagtgg
gccaagaggatccctcacttttcagagctgcctttagatgatcaggttattctactacgg
gcaggctggaatgagctcctcattgcgtccttctcacaccgctcagtcacagtaaaagat
ggaatcctattagccacaggcctccacgtccacagaagcagcgcccacagtgccggagta
ggctccatctttgacagagttttgacagagttggtgtctaaaatgaaagacatgaagatg
gacaagacagagcttggctgccttcgagctatcgtcctattcaacccagatgcaaagggt
ctgtcaaatccaccagaggtggaaggtcttcgggagaaagtctatgcctcgctggagtcc
tacaccaaagccaagtacccagaccagcccggcaggtttgccaaactgttgctacgtctc
cccgccctgcgatccataggccttaagtgtctggagcacctgttcttcttcaaactgata
ggagacacgcccatagacaccttcctcatggagatgcttgaagcacctcatcaaatcaca
tga
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