Esox lucius (northern pike): 105010373
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Entry
105010373 CDS
T04894
Symbol
vars
Name
(RefSeq) valine--tRNA ligase isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
els
Esox lucius (northern pike)
Pathway
els00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
els00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
105010373 (vars)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
els01007
]
105010373 (vars)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
els03016
]
105010373 (vars)
Enzymes [BR:
els01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
105010373 (vars)
Amino acid related enzymes [BR:
els01007
]
Aminoacyl-tRNA synthetase
Class I (U)
105010373 (vars)
Transfer RNA biogenesis [BR:
els03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
105010373 (vars)
Prokaryotic type
105010373 (vars)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
GST_C
tRNA-synt_1g
tRNA-synt_1_2
GST_C_2
Val_tRNA-synt_C
GST_C_3
Jag_N
tRNA-synt_1e
Motif
Other DBs
NCBI-GeneID:
105010373
NCBI-ProteinID:
XP_028971756
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All DBs
Position
LG20:27392440..27406971
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AA seq
1311 aa
AA seq
DB search
MCARLHHTDLTTPPTTVFICITYVTSLSSSFKGMASLYVSPHPDDFRSLLALIAAEFCPS
PPRALTDEPPASLALHSCPSLVLGDGGSEVLSGASAVGWYLASQGKRTGLDTKQQSQVWQ
WLSFADNELTPVACAVVFPLLGVLGVDKKLQQSSHAEMIRILKVLDKNLEPKTFLVGESL
TLADIAMATAALLPFKYALEASDREALTNVTRWFLTCVNQPQFVKVLGQISLCEKMVPVI
SKPGAAPVPPPAVASKTSPTADAADEKPKTEAQLKKEAKNREKLEKFQKKKEMEEKKKQE
KKLAPPTEKKAKPEKKELGTISYDVPTPPGEKKDVLRPLPDSYSPQYVEAAWYPWWEKQG
YFKPEHGRKSVSEPNPRGVFMMCIPPPNVTGSLHLGHALTNAIQDCLTRWHRMRGETTLW
NPGCDHAGIATQVVVEKKLMRERGMSRHDLGRDQFIQEVWKWKNEKGDRIYHQLKKLGSS
LDWDRACFTMDPKLSYAVQEAFIRLHEDGVIYRSKRLVNWSCTLNSAISDIEVDKRELTG
RTLLPVPGYKDKVEFGVLVSFAYKIEGSDEEVIVATTRIETMLGDTAVAVHPADPRYQHL
KGKMVVHPFCDRKMPVVFDDFVDVSFGTGAVKITPAHDQNDYEVGNRHNLAFINIMDENG
LLINVPPPFLGMKRFEARKAVLQALKDLGQFKEIKDNPMVVPVCSRSKDIVEPLLKPQWY
VDCADMGKQAADAVREGRLKIIPDHHLKTWFNWMDNIRDWCISRQLWWGHRIPAYFVTVN
DPSVKPGEDMDGHYWVSGRTEDEAKEKAAKRFNISTDKITLRQDEDVLDTWFSSGIFPFS
IFGWPNKTQDLSVFYPGTLLETGHDILFFWVARMVMMGLKLTGQLPFKEVYLHAVVRDAH
GRKMSKSLGNVIDPLDVITGISLEGLYAQLNDSNLDPVEVEKAKQGQKSDYPSGIPECGT
DALRFALCAYTSQGRDINLDVNRILGYRHFCNKLWNAVKFAMRSLGDSFVPSEKAQLSGQ
EGVSDRWVLSRLCAAVGLCNAGFQAYDFPAITTAIYNFWLYELCDVYLECVKPVFSRAEE
DSVSQSQAAVCRQTLYTCLETGLRLLAPIMPFVGEELYQRLPRRQSQDASASIHVTSYPE
TAEFCWHSEEVDRQMDFVMTVVRTIRSLRADYNLTKTRADCYLQCIDSETVTLVEQYSLQ
IQTLSLSQTVQPVPATGAVPEGCAVAIASDRCTVNLMLKGLIDLEKEVAKLTVKKGELEK
QMEKLRERMEKSDYKEKVPVKVQELDAEKLRQSQTELEKAKEAIDNFMRMM
NT seq
3936 nt
NT seq
+upstream
nt +downstream
nt
atgtgcgccagattgcatcacacggatctcaccacaccgccgactacagtgtttatctgc
atcacatatgtgacgtctctttcttcttcattcaaagggatggcttctctctatgtctcc
ccccaccctgacgacttcaggagcctcctggctctgattgcagcagagttctgcccctct
ccgccccgcgctcttacagatgagccgccagcttccctagcccttcactcttgccccagt
ttggtgctaggtgatgggggaagtgaggtcctctctggagccagtgctgttggatggtac
ctggcctctcagggcaagaggacagggttggatactaagcagcagagccaggtgtggcaa
tggctcagctttgctgacaatgagttaactcctgtggcctgtgctgtggttttccccctg
ctgggggtgctgggagtggacaagaagcttcagcagagttctcacgctgagatgattcgc
attctcaaagttctagataagaacctggaacctaaaaccttcctggtgggagagagcctc
actctggctgacatcgctatggcaactgctgcactcctgcccttcaaatatgccttggag
gcgtccgacagggaagccctgaccaacgtgaccaggtggtttctgacctgtgtcaaccag
ccccagttcgtcaaggttctgggacagatctccctgtgtgagaagatggtgccagtcatc
tccaagcccggcgctgctccggttccacctcccgccgttgcttccaaaaccagcccaact
gctgatgctgccgatgagaaaccaaagacagaagctcaactgaagaaggaagctaagaac
cgagagaagctggagaagttccaaaagaagaaggagatggaggagaagaaaaagcaagaa
aagaaactagcacccccgacagagaaaaaggccaaaccagagaagaaggagctgggaacg
atctcctatgacgtccccacccctccaggagagaaaaaagacgtgctgaggcctctgcca
gattcctacagtcctcagtatgtggaggcagcctggtacccttggtgggaaaaacagggc
tatttcaagcctgagcacgggcggaagagtgtcagtgagccgaacccccgtggagtcttc
atgatgtgtatccctccgcccaatgtgaccggatcccttcacttaggccacgccctaacc
aacgccatacaggactgcctgactagatggcatcgcatgcgcggcgagaccaccctgtgg
aacccgggctgtgaccacgcgggcatcgccacccaggtggtggtggagaagaagctgatg
agggagaggggcatgagccgacacgacctgggcagggaccagttcatccaggaggtctgg
aagtggaagaacgagaagggagatcgcatctaccaccagctgaagaagctgggctcctcg
ctggactgggaccgagcctgcttcaccatggacccgaaactgtcctacgcagtgcaggag
gcgttcattcgcctgcatgaggacggtgtgatctaccggagcaagagactggtaaactgg
tcctgtaccctgaactctgccatctccgatatagaggtggataagcgggagttgactggg
cggaccctcctgccggtgcctggttacaaggacaaggtggagtttggagtcctggtttct
ttcgcttacaagatagagggatcagatgaggaggtgattgtggccaccactcgtattgag
accatgttgggagacactgccgttgccgtgcaccctgcggatcccagataccagcacctg
aaagggaagatggtggtgcatcctttctgtgaccggaagatgcccgtggtgtttgacgac
tttgtggatgtgagcttcggaacaggtgcggtgaagatcaccccagcccatgaccagaat
gattatgaggttggcaacaggcacaacctggccttcatcaacatcatggatgagaatggc
ctgctcatcaacgttccccctccgttcctgggtatgaagcgttttgaggcgaggaaggct
gtgctgcaggctctgaaggacctggggcagtttaaggagatcaaagacaaccccatggtg
gtccctgtctgcagtcgttctaaggacatcgtggagcccctgctcaagcctcagtggtat
gtggactgtgctgacatgggcaagcaggctgcagacgccgtccgggagggacgactcaaa
atcatccctgaccaccaccttaagacctggttcaactggatggataacatcagggactgg
tgtatctcccgtcagctgtggtggggtcacaggatcccagcctactttgtcactgttaat
gacccttcagtcaaaccaggagaagacatggatggtcactactgggtgagtggaaggaca
gaggacgaggccaaagagaaggccgccaagcgcttcaacatctcgacggacaagatcacc
ctcagacaggatgaggatgttctggacacctggttttcctccggtatttttcccttctct
atcttcggctggcccaacaagacacaggacctgagtgtgttctacccggggacgctcctg
gagaccggtcatgacatcctgttcttctgggtggcacgcatggtgatgatgggcctcaag
ctcactggccagctgcccttcaaagaggtgtatctgcatgcagtggtgcgggacgcccac
gggaggaagatgagtaagtctctggggaatgtcatcgaccctctggacgtcatcacgggc
atctctctggagggtctgtatgcccagctgaatgacagtaacctggacccggtggaggta
gagaaggccaagcagggacagaagtccgactacccctctggcatccctgagtgtggcaca
gacgccctccgctttgccctgtgtgcctacaccagccaaggcagggacattaacctggat
gtgaatcgtattcttggttaccgtcacttctgtaacaagctgtggaatgctgtgaagttt
gccatgaggtctctgggagacagctttgttccttcagagaaagcccagctgtcaggacag
gagggtgtctctgaccggtgggttctgtcccggctgtgtgctgctgtgggtttgtgtaat
gcaggtttccaggcctacgacttcccagccatcaccacagccatctacaacttctggctc
tacgagctctgtgacgtctatctggagtgtgtgaagccagtgttctccagggcggaggag
gacagcgtttctcagagccaggctgcagtctgcagacagactctgtacacctgcctggag
accggcctgcgtctccttgctcccataatgccctttgtgggtgaggagctctaccagagg
ttgccacggcgacagtcccaggacgccagtgctagtatccatgtgacgtcctaccctgag
acggctgagttctgctggcacagcgaggaggtggaccggcagatggactttgtgatgacc
gtggtccggaccatccggtcactcagggcggactacaacctgaccaagacccgggctgac
tgctacctccagtgtatagacagtgagactgtgaccctggtggagcagtacagtctgcag
atccagaccctgtccctgtcccagaccgttcagcctgtcccggccactggggccgtccca
gagggctgtgctgtggccatcgcctctgacaggtgcacagtcaacctcatgctgaagggt
ctgatagacttggagaaggaggtggccaaactgactgtaaaaaagggagagctggaaaaa
cagatggagaaactcagggagaggatggagaagagtgactacaaggagaaggtgcctgtc
aaagtacaggagctggatgctgagaagctgcgacaaagccagacagagctggagaaagca
aaggaagccatagacaacttcatgagaatgatgtaa
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