Esox lucius (northern pike): 105010518
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Entry
105010518 CDS
T04894
Symbol
ccdc88a
Name
(RefSeq) girdin isoform X1
KO
K25392
girdin
Organism
els
Esox lucius (northern pike)
Brite
KEGG Orthology (KO) [BR:
els00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
els03037
]
105010518 (ccdc88a)
Cilium and associated proteins [BR:
els03037
]
Primary cilia and associated proteins
Other primary cilia associated proteins
105010518 (ccdc88a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HOOK_N
GAS
KASH_CCD
DUF4472
bZIP_2
Motif
Other DBs
NCBI-GeneID:
105010518
NCBI-ProteinID:
XP_010868137
LinkDB
All DBs
Position
LG06:complement(14449433..14508836)
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AA seq
2032 aa
AA seq
DB search
MESEVFTPLLEQFLLTPLVAWVKASGHSSGNDGTKLSEYIELVDGIYLNEIMLEINPKAT
VQRTNKKVNNDSTLRIQNLSILIRQMKSYYQETLQQLVVMPLPNVLVLGRNPLSEQGLEE
MKKLLLLLLGCAVQCEKKEEYIERIQTLDFDTKAAIASHIQEVTHNQENVVDLQWLEGGE
LPPEDLDSFSRNMAFHLKRLVDERDDQLETIVELTQERDCGQYSPQPLFAQSPNDSPSMR
RTESRQHLSVELADAKAKIRRLRQELEEKSEQLLDCRQELDNMETEHKRIQQESLQLLSD
ARSARSYRDELDALREKAVKVDKLESEVARYKERLHDIEFYKARVEELKEDNQVLLETKA
MLEDQLEGTRARSDKLHELEKESLQLKSKIHDMEMERDMDRKRIEELLEENLVLEMAQKQ
SMDESLHLGWELEQLSKTPDLAEVPQKSLGHEVNELTSSRLLKLEKENQALLKTVEELRR
SASEDASARLLRAERENQRLTKRLEQLDSELNTDRESLCSAESLSTDLMKEKALLEKTLE
TLRENSERQVKGLEQENEHLTQTVLSLRQRSQVGAEARVKDVEKENRVLHESIRETSSKL
NKLEFERKQLRKDFEVYKEKSERAEELEEEVQRLERENEALQKRVASLGITCEKVASLEK
ENSELEAEGRRLKKKVDSLRSTSFQLEALEKENAQLDEENLELRRAAEVLRSAGNKAAQL
EFENRELESERSQLKRSVELLKASSKKTERLEMSNQGLDTENQRLQKALENSSRKIQQLE
GELQDVEQENQSLQRSLEELKISSKRLEQLEQENKTLEQESSQLEKDKKQLEKENKRLRQ
QAEIRDSKLDEDNLRISHLEKENRSLGKEMISFKDSCNRLKDLEKENKELVKQATIDKKT
LVTLREELVSEKLRTQQMNNDLEKLTHELEKIGLNKERLLQDEQSFDDDRYKLLEHKLES
TLKSSLEIKEEKIAALEARLQESSNLNQQLRQELKTVKKNYEALRQREEEERMVQSSPPR
GGDRDDSLGVNKWEKESHETTRELLKVKDRLIEVERNNATLQAEKQALRTNLKQLETQTT
NLQAQILALQRQTASLQENNTTLQTQNAKLQVENSTLNSQTSTLMAQNAQLAAQQASTEN
EKEGAVREREELRSTYEMLLRDHDMLAALHERQASEYEGLIGKHGGLKSAHKSLESQHRD
LEDRYNQLLRQKDQLEELEKQLKAEQEKMLSENKQHEATAAEFHKLKAENERLNTAHRQL
IKDNEGLQVDHKNLKSQVNTATLEHTRLEAEFSKLKEQYQQLDITSTKLTNQCELLSQLK
GNLEEENRHLLDQIQTLMLQNRTLLEQTMESKDMYHVEQRQYIDKLNELRRQKEKLEEKI
MDQYKFYDPSPPRRRGNWIALKMKKLIKPRSRERMRSLTLTPTRSESSEGFLGLPLDSQD
SSSIGSGSNSLDDTLAHKRSSRKRDSQRVQHFHVQGTQGSFNALKRLPFMRNRSKEKDKE
KAIYRRSMSMNDLLQTMALSGGQWAGSTDNLDGPEEANGGSSNRHLKELRSMAFSTNAIN
YSTLTLPSGNRAKRSLKVKDNASCEDVPASSEDLVGMRGQASRPSSLHSIKTISSNSNNN
SHSSPLEAKGTLNGHLSRPHSESSGEFSLGVDQEVWSSGSSPVQLPLTRSSHQSPMLLRR
SLDTPANLARKKTASSTGSASEVVSLQQFLEESIDPAESGSQENLTVESPRLSGGAEHVL
RDPAERGSTTGTKGRGILRSASGKATTPMNSDGRPPRSGQPGRPSLRKAESTRVKGTAPP
RVSLSSQSKAMSVSERLDMASSSGLPRASSVISTAEGFTRRTSIHDLLSKDARQPVSVDP
SPSSKALAHSSTTPSEYPPSKNPSQHPAHEFPPPAPVPPSLPKSVSMPCTGGQQSHSSKE
TDRSSLESFFGSSFTVESVFMDSIFSEPAFTGGKSHTFLSLNTSLVSNISGPPGKTPPRP
NPVQTAQIQPNGQKSCPSDQEVVDPNHVIDAGQSPTLSPEDQQSLWYEYGCV
NT seq
6099 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcgaggtttttacaccgttgctggagcaatttctgctcacgcctttggttgcc
tgggttaaagcgtctggacattcatctggaaacgatggcaccaaactatcggaatacatt
gaattagtcgatggcatttatttaaatgagattatgcttgaaataaatccaaaagccact
gttcaacgaaccaacaagaaagtgaacaatgactcgaccctgcgcatacagaacctctcc
atcctgatccgacagatgaagtcctactaccaggagaccctccagcaactggtggtgatg
cctctccccaacgtgttggtgctgggcaggaaccctctcagtgagcaaggtctggaggag
atgaagaagctgttgttgttgttacttggctgtgccgttcagtgtgagaagaaagaagag
tacattgagaggatccagaccctagattttgacacaaaagccgccatagcatctcacatc
caagaggtgactcacaaccaggagaatgttgtggacctgcagtggctggaagggggtgag
ttgcccccagaggacctggactctttctccaggaacatggctttccatcttaaacgcctg
gtggatgagcgagacgaccagctggagacaatagttgagctgacccaggagagggactgt
ggacagtactctccccagcctctcttcgcccagtcacccaatgactcgcccagcatgcgg
cgcaccgagagccgccagcacctgtccgtggagctggctgacgccaaggccaagatcagg
cggctgcgccaggagctggaggagaagagtgagcagctgctggactgtaggcaggagctg
gataacatggagacggagcataaaaggattcagcaagagagcctgcagttgttgtcagac
gcacgttctgccaggtcctatcgtgacgaactagatgctctgagggagaaagccgtcaag
gtggacaagctggagagtgaagtggcacgctacaaggagaggctccatgacatcgagttc
tataaagccagagtggaggagcttaaggaggacaaccaggttctgcttgagaccaaggcc
atgcttgaggaccagcttgaaggaaccagagctcgttctgacaaacttcacgaactggag
aaggagagtctgcagctaaaatccaagattcatgacatggaaatggagcgggacatggac
aggaagcgtattgaggagctgcttgaggagaacctggtcctggaaatggcccagaaacag
agcatggatgagtccctccacctgggctgggagctggagcagctctccaagaccccggac
ctagcagaggtgcctcagaagtccctgggtcatgaggtgaatgagctgacatccagccgc
ctgctgaagctggagaaggagaaccaggccctgctgaagactgtggaggagttgaggcgc
tctgccagtgaagatgcctctgcacgcctcctcagggccgaacgggagaaccaaaggctc
accaaaaggctggagcagttagacagtgaactgaacacagaccgggagagtctttgcagt
gcagagagcctcagtactgacttgatgaaggagaaggctctgctggagaagaccctagag
acactgagagagaactctgagagacaggtgaaaggtctggagcaggagaacgagcacctg
acccagactgttttgtcattgaggcaacgctctcaagtgggtgcagaggcgcgggtcaaa
gacgtggagaaggagaaccgggtccttcacgagtccatccgggagaccagctccaaactc
aacaagctagagtttgagcgcaagcagctgcgtaaggactttgaagtgtacaaggagaag
agtgagagggctgaagagctggaggaggaggtgcaacggttggaaagggagaatgaggcc
ctgcagaaacgagtagccagtctgggcatcacatgtgaaaaggtggcatctctggaaaag
gagaactctgagctagaggctgagggtcgtcgactaaagaagaaggtggacagtctgcgg
agcacctccttccagctggaggctctggagaaggaaaatgcccagctagacgaagagaac
ctggagctccgtagggctgccgaggtgcttcgctcagcagggaacaaggcggcccaactg
gagttcgaaaaccgtgagctggagagtgagaggagccagctaaagaggagtgtggagttg
ctcaaagcctcatccaagaaaactgagaggcttgaaatgagcaaccagggcctggacacg
gagaaccagcggctgcagaaggccctggagaacagcagccgcaagatccagcagctggag
ggggagctgcaggacgtagagcaggagaaccaaagcctgcagaggagcctggaagaactg
aagatctccagcaagcgcctagaacagttggagcaagagaataagactttggagcaggag
agctctcagttggaaaaggacaagaagcagctggagaaggagaacaagaggctgagacag
caggccgagatcagggactccaagttggatgaggacaacctgaggatcagtcacttggag
aaggagaaccgctccctgggcaaggagatgatctcattcaaggactcctgcaaccggctc
aaagacctggagaaggagaataaggagctagtcaaacaggctaccatcgataagaagaca
ctggtcactctgcgagaggaactggtgagtgagaaactgaggactcagcagatgaacaat
gacctagaaaaactgacccacgaactggagaagataggccttaacaaggaaagactgctg
caggatgagcaaagctttgatgatgacaggtacaagctgctggagcacaagctcgagtcc
actctaaagtcctctttggagatcaaggaggagaaaatagctgctttggaggccagactg
caggaatcctctaacctcaaccaacaattgcgtcaggagctcaaaactgtgaagaagaac
tacgaggccttgcgacaaagggaggaggaggagaggatggtacagagctcgccccccaga
ggaggggacagggacgactctttgggggtcaacaagtgggagaaggagagtcatgagacc
acccgggaactgctcaaggtcaaagaccgccttatcgaggtggagaggaataatgccacc
ctccaggcagagaagcaggccctgcgtaccaacctgaagcagctggagacccagacaacc
aacctccaggctcagattctggctttacagagacagactgcctctctgcaggagaacaac
accacactacagacccagaatgctaaactccaagtagagaactccacgctgaactcccag
actagtactctcatggctcagaatgcccagctggcagcgcagcaggccagtacggaaaac
gagaaggaaggagcagtgagggagagggaggagctgcggtcaacctacgagatgctgctg
cgggaccacgacatgctggccgccctgcacgagagacaggcctcggagtacgaaggcctc
atcggcaaacacggaggcctgaagagcgcccacaagagcctggagagtcagcatagagac
ctggaggacaggtacaaccagctgctacggcagaaggatcagctggaggagctggagaaa
cagctgaaggccgagcaggagaagatgctgtctgagaacaagcagcacgaggccacggct
gcagagttccacaaactgaaggcggagaacgaaagactgaacacggcacaccgtcagcta
atcaaggacaacgagggcctacaggtggaccataagaacctgaagagccaggtgaacact
gccacgttggagcacacccgtctggaggcagagttttccaaactcaaagagcagtaccaa
cagctggatatcacctccaccaagttaaccaatcagtgtgagttgttgagtcagttaaag
ggaaatctggaggaggagaaccgccatctgttggaccagatccagaccttgatgttgcag
aaccgcaccctgctagaacagacaatggagagcaaggacatgtaccacgtagaacagaga
cagtacatagataaactgaatgagttaaggagacagaaggagaagctggaagagaagatc
atggaccagtataagttttatgacccatcaccacctcggagacggggtaactggatcgcg
ctgaagatgaagaagctgatcaagccgaggagtcgtgagaggatgcgttccttgactcta
acacccacgcgctccgagtccagcgagggcttcctgggccttcccctggacagccaggac
tcttcctctataggctccggttccaactccctggacgacacgctagcacacaagaggagc
agcaggaagagagactctcagagagtgcagcacttccatgtgcagggtacccagggttcc
ttcaatgctctgaaaaggttgccctttatgaggaaccgatcgaaggagaaagacaaagaa
aaggccatctaccgccggtccatgtctatgaacgacctacttcagaccatggctctgtcg
ggtggccagtgggctgggagcacagataatctggatgggccagaggaagccaacggtggc
agcagtaaccggcacctgaaggaactgcgctccatggccttttccaccaacgctatcaac
tacagcaccctcaccctgccatctgggaacagggccaagaggagcctgaaggtcaaagac
aacgcttcctgtgaagacgtcccagcgtcatcagaagacctcgttgggatgagaggtcaa
gcctccagaccctccagtctccatagcatcaagaccatcagtagtaatagcaataataac
tcccactcctcgccgctcgaggccaaaggcacgttgaacggccacctcagcaggccccac
agtgagagcagtggggagttcagcctcggtgtggaccaggaagtgtggtcgagcgggagc
agccctgtccagctgcccctgacccgctcttctcaccagagtcccatgctgctgcggaga
tccctggacaccccagccaacctggccagaaagaagacggccagttccacgggcagtgcc
agcgaggtggtctctctgcagcagttcctggaggagagcatcgaccctgccgagtctggc
agtcaagagaatctgaccgttgaatctccccgcctctctggaggtgctgagcatgtgctg
agagacccggctgagcgcggctccaccactggcactaagggacgtggcattctgcgctca
gccagcggaaaggcgacgacgccgatgaactctgacggccggccccccaggagtggtcaa
ccaggtcgccccagcctacggaaggcggagagtacccgtgtgaagggcacggccccgccc
cgggtcagcctctcctcccagagtaaagccatgtccgtgtctgagcgcctcgacatggcc
tcctcctccggtctgccccgggccagcagcgtcatctccacggccgagggctttacgcgt
cggaccagcatccatgacctgctgtccaaagacgcccgccagcccgtgtctgtagacccc
tcgccctcctcaaaggccttggctcactcctccaccacgcccagtgagtaccccccgtcc
aaaaacccctcccagcacccagcccacgagttccccccaccagctcctgtgcccccgtct
ctgcccaagtcagtcagcatgccctgcacaggcggtcagcagtcccacagtagtaaggaa
actgaccgttccagcctggagtctttctttggctcctcctttacagtcgagtcagtattc
atggactccatcttcagtgagccagctttcactggcggcaagagccacacattcctgtcc
ctcaacacttccctggtcagtaacatcagcggtcccccaggcaagacacccccccggccc
aatcctgtccaaaccgctcagatccaaccaaacggacagaagtcctgcccctctgaccag
gaggtcgttgaccccaatcatgtgattgatgctggccaatccccaacccttagcccagag
gaccaacagtcattgtggtatgaatatgggtgtgtctga
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integrated database retrieval system
